Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 HSPE1P7-201ENST00000604681 321 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 AL080274.1-201ENST00000605565 220 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 Y_RNA.812-201ENST00000610788 101 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 Y_RNA.784-201ENST00000613803 101 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 AL161629.2-201ENST00000615347 275 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 Y_RNA.787-201ENST00000616522 101 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 Y_RNA.780-201ENST00000617336 101 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 5S_rRNA.12-201ENST00000617631 107 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 Y_RNA.801-201ENST00000619005 101 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 AC073308.1-201ENST00000623696 305 ntBASIC4□□□□□ -1.77
RAPGEF3O95398 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAPGEF3O95398 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
RAPGEF3O95398 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RAPGEF3O95398 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAPGEF3O95398 Y_RNA.138-201ENST00000363462 102 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 Y_RNA.395-201ENST00000383945 109 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 RNU6-310P-201ENST00000384655 107 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 MIR517A-201ENST00000385001 87 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 Y_RNA.594-201ENST00000410373 140 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 AL117339.3-201ENST00000418733 162 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 AC099548.1-201ENST00000421443 426 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 AC093151.1-201ENST00000427711 313 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.99□□□□□ -1.77
RAPGEF3O95398 AL353705.4-201ENST00000449661 238 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 AL031274.1-201ENST00000450334 232 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 AC133134.1-201ENST00000466800 359 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.99□□□□□ -1.77
RAPGEF3O95398 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.99□□□□□ -1.77
RAPGEF3O95398 Y_RNA.687-201ENST00000516558 91 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 AC009229.3-201ENST00000608056 282 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 AC244517.12-201ENST00000623581 663 ntBASIC3.99□□□□□ -1.77
RAPGEF3O95398 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.99□□□□□ -1.77
RAPGEF3O95398 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.99□□□□□ -1.77
RAPGEF3O95398 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
RAPGEF3O95398 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
RAPGEF3O95398 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAPGEF3O95398 Y_RNA.151-201ENST00000363566 112 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 Y_RNA.197-201ENST00000364004 102 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 RNU5E-7P-201ENST00000365290 117 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 RNU6-596P-201ENST00000365395 98 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 Z98749.2-208ENST00000381646 500 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 RNU6-306P-201ENST00000384617 107 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 Y_RNA.646-201ENST00000410980 101 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.98□□□□□ -1.77
RAPGEF3O95398 ARF4P2-201ENST00000430209 526 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 HIGD1AP2-201ENST00000446367 280 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 AC013470.1-201ENST00000453438 462 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 BTF3P15-201ENST00000455606 336 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 AC018437.1-201ENST00000492214 406 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 RNU6-307P-201ENST00000516743 106 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 RNU6-711P-201ENST00000517255 106 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.98□□□□□ -1.77
RAPGEF3O95398 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.98□□□□□ -1.77
RAPGEF3O95398 TRAV32-201ENST00000553993 340 ntBASIC3.98□□□□□ -1.77
RAPGEF3O95398 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.98□□□□□ -1.77
RAPGEF3O95398 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.98□□□□□ -1.77
RAPGEF3O95398 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RAPGEF3O95398 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAPGEF3O95398 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAPGEF3O95398 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAPGEF3O95398 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.97□□□□□ -1.77
RAPGEF3O95398 RNU6-933P-201ENST00000384424 107 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 MIR518D-201ENST00000385014 87 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 MIR548P-201ENST00000408336 84 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 RNU6-1304P-201ENST00000411374 106 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 USP9YP30-201ENST00000430729 455 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 AC098831.1-201ENST00000440661 216 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.97□□□□□ -1.77
RAPGEF3O95398 MTCO3P10-201ENST00000455912 772 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 RPL26P9-201ENST00000457466 433 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 U8.21-201ENST00000459536 136 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 Y_RNA.631-201ENST00000459607 101 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 Y_RNA.670-201ENST00000516255 105 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 AP004607.1-201ENST00000524456 203 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.97□□□□□ -1.77
RAPGEF3O95398 MIR3186-201ENST00000577404 85 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 CPDP1-201ENST00000579660 283 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 AC005899.2-201ENST00000584353 90 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.97□□□□□ -1.77
RAPGEF3O95398 AC011494.1-201ENST00000596454 237 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 AC018889.1-201ENST00000605372 397 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 AL121917.1-203ENST00000605534 577 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.97□□□□□ -1.77
RAPGEF3O95398 MIR6134-201ENST00000617606 109 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 U4.7-201ENST00000638126 106 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 MTND4P27-201ENST00000450813 1354 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 MTND5P19-201ENST00000424872 1794 ntBASIC3.97□□□□□ -1.77
RAPGEF3O95398 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
RAPGEF3O95398 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.96□□□□□ -1.77
RAPGEF3O95398 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAPGEF3O95398 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RAPGEF3O95398 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAPGEF3O95398 Y_RNA.326-201ENST00000365176 113 ntBASIC3.96□□□□□ -1.78
RAPGEF3O95398 RNU6-827P-201ENST00000365553 106 ntBASIC3.96□□□□□ -1.78
RAPGEF3O95398 RNU6-1077P-201ENST00000410506 102 ntBASIC3.96□□□□□ -1.78
RAPGEF3O95398 RNU6-325P-201ENST00000411132 105 ntBASIC3.96□□□□□ -1.78
RAPGEF3O95398 AL135786.1-201ENST00000415892 214 ntBASIC3.96□□□□□ -1.78
RAPGEF3O95398 RPL31P12-201ENST00000422587 358 ntBASIC3.96□□□□□ -1.78
RAPGEF3O95398 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms