Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
MBD4O95243 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.75□□□□□ -1.97
MBD4O95243 ZNF658B-202ENST00000615961 3375 ntBASIC2.75□□□□□ -1.97
MBD4O95243 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MBD4O95243 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.74□□□□□ -1.97
MBD4O95243 Y_RNA.41-201ENST00000362646 102 ntBASIC2.74□□□□□ -1.97
MBD4O95243 MIR544A-201ENST00000384855 91 ntBASIC2.74□□□□□ -1.97
MBD4O95243 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MBD4O95243 RPS29P13-201ENST00000402041 169 ntBASIC2.74□□□□□ -1.97
MBD4O95243 RN7SKP158-201ENST00000410453 326 ntBASIC2.74□□□□□ -1.97
MBD4O95243 RNU6-293P-201ENST00000411259 106 ntBASIC2.74□□□□□ -1.97
MBD4O95243 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.74□□□□□ -1.97
MBD4O95243 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MBD4O95243 RNU7-138P-201ENST00000459479 64 ntBASIC2.74□□□□□ -1.97
MBD4O95243 Y_RNA.654-201ENST00000497848 106 ntBASIC2.74□□□□□ -1.97
MBD4O95243 RNU6-1281P-201ENST00000516223 105 ntBASIC2.74□□□□□ -1.97
MBD4O95243 SNORD60.2-201ENST00000516883 86 ntBASIC2.74□□□□□ -1.97
MBD4O95243 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.74□□□□□ -1.97
MBD4O95243 AC115990.1-201ENST00000526957 301 ntBASIC2.74□□□□□ -1.97
MBD4O95243 AP002770.2-201ENST00000543613 532 ntBASIC2.74□□□□□ -1.97
MBD4O95243 AC025165.5-201ENST00000602802 578 ntBASIC2.74□□□□□ -1.97
MBD4O95243 AC092747.3-201ENST00000603769 301 ntBASIC2.74□□□□□ -1.97
MBD4O95243 AC092954.2-201ENST00000609103 430 ntBASIC2.74□□□□□ -1.97
MBD4O95243 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MBD4O95243 RNU6-428P-201ENST00000362942 107 ntBASIC2.73□□□□□ -1.97
MBD4O95243 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MBD4O95243 SNORD116-4-201ENST00000384733 96 ntBASIC2.73□□□□□ -1.97
MBD4O95243 MIR561-201ENST00000385216 97 ntBASIC2.73□□□□□ -1.97
MBD4O95243 RNU6-1106P-201ENST00000390845 107 ntBASIC2.73□□□□□ -1.97
MBD4O95243 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.73□□□□□ -1.97
MBD4O95243 AIMP1P2-201ENST00000425294 312 ntBASIC2.73□□□□□ -1.97
MBD4O95243 CR769767.1-201ENST00000436337 346 ntBASIC2.73□□□□□ -1.97
MBD4O95243 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.73□□□□□ -1.97
MBD4O95243 AC009238.1-201ENST00000442165 424 ntBASIC2.73□□□□□ -1.97
MBD4O95243 AC009237.6-201ENST00000446969 424 ntBASIC2.73□□□□□ -1.97
MBD4O95243 AC087884.1-201ENST00000469738 328 ntBASIC2.73□□□□□ -1.97
MBD4O95243 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.73□□□□□ -1.97
MBD4O95243 RPL30P1-201ENST00000488676 339 ntBASIC2.73□□□□□ -1.97
MBD4O95243 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.73□□□□□ -1.97
MBD4O95243 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MBD4O95243 RNU6-720P-201ENST00000516363 108 ntBASIC2.73□□□□□ -1.97
MBD4O95243 RNU6-314P-201ENST00000516574 104 ntBASIC2.73□□□□□ -1.97
MBD4O95243 RNA5SP82-201ENST00000516707 92 ntBASIC2.73□□□□□ -1.97
MBD4O95243 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.73□□□□□ -1.97
MBD4O95243 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.73□□□□□ -1.97
MBD4O95243 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.73□□□□□ -1.97
MBD4O95243 EIF1P4-201ENST00000572664 335 ntBASIC2.73□□□□□ -1.97
MBD4O95243 MIR6766-201ENST00000622641 72 ntBASIC2.73□□□□□ -1.97
MBD4O95243 AL160394.1-201ENST00000624765 724 ntBASIC2.73□□□□□ -1.97
MBD4O95243 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.73□□□□□ -1.97
MBD4O95243 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
MBD4O95243 Z82209.1-201ENST00000422141 2135 ntBASIC2.72□□□□□ -1.97
MBD4O95243 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
MBD4O95243 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
MBD4O95243 RNU6-827P-201ENST00000365553 106 ntBASIC2.72□□□□□ -1.97
MBD4O95243 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
MBD4O95243 MIR181A1-201ENST00000385026 110 ntBASIC2.72□□□□□ -1.97
MBD4O95243 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
MBD4O95243 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.72□□□□□ -1.97
MBD4O95243 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.72□□□□□ -1.97
MBD4O95243 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.72□□□□□ -1.97
MBD4O95243 AC243964.1-201ENST00000441814 261 ntBASIC2.72□□□□□ -1.97
MBD4O95243 MTND3P16-201ENST00000452205 344 ntBASIC2.72□□□□□ -1.97
MBD4O95243 RPL21P99-201ENST00000480369 423 ntBASIC2.72□□□□□ -1.97
MBD4O95243 RPL38P4-201ENST00000502376 214 ntBASIC2.72□□□□□ -1.97
MBD4O95243 AK3P2-201ENST00000507976 429 ntBASIC2.72□□□□□ -1.97
MBD4O95243 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.72□□□□□ -1.97
MBD4O95243 RN7SKP256-201ENST00000517201 314 ntBASIC2.72□□□□□ -1.97
MBD4O95243 AL157687.1-201ENST00000554853 619 ntBASIC2.72□□□□□ -1.97
MBD4O95243 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.72□□□□□ -1.97
MBD4O95243 MIR3945-201ENST00000581853 98 ntBASIC2.72□□□□□ -1.97
MBD4O95243 MIR4298-201ENST00000584380 73 ntBASIC2.72□□□□□ -1.97
MBD4O95243 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.72□□□□□ -1.97
MBD4O95243 AC107304.1-201ENST00000604229 296 ntBASIC2.72□□□□□ -1.97
MBD4O95243 AC012557.2-201ENST00000605919 418 ntBASIC2.72□□□□□ -1.97
MBD4O95243 YWHAEP7-203ENST00000622054 312 ntBASIC2.72□□□□□ -1.97
MBD4O95243 AC090517.3-201ENST00000625170 141 ntBASIC2.72□□□□□ -1.97
MBD4O95243 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
MBD4O95243 AC068137.3-201ENST00000639191 341 ntBASIC2.72□□□□□ -1.97
MBD4O95243 RNU1-91P-201ENST00000364746 163 ntBASIC2.71□□□□□ -1.98
MBD4O95243 SNORA67.1-201ENST00000364749 141 ntBASIC2.71□□□□□ -1.98
MBD4O95243 RNU4-20P-201ENST00000365601 151 ntBASIC2.71□□□□□ -1.98
MBD4O95243 MIR29B2-201ENST00000385055 81 ntBASIC2.71□□□□□ -1.98
MBD4O95243 MIR514A2-201ENST00000385131 88 ntBASIC2.71□□□□□ -1.98
MBD4O95243 MIR514A3-201ENST00000385132 88 ntBASIC2.71□□□□□ -1.98
MBD4O95243 MIR221-201ENST00000385135 110 ntBASIC2.71□□□□□ -1.98
MBD4O95243 MIR524-201ENST00000385242 87 ntBASIC2.71□□□□□ -1.98
MBD4O95243 RNU6-780P-201ENST00000391030 104 ntBASIC2.71□□□□□ -1.98
MBD4O95243 AL590002.1-201ENST00000406554 418 ntBASIC2.71□□□□□ -1.98
MBD4O95243 RN7SKP223-201ENST00000410582 62 ntBASIC2.71□□□□□ -1.98
MBD4O95243 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.71□□□□□ -1.98
MBD4O95243 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.71□□□□□ -1.98
MBD4O95243 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.71□□□□□ -1.98
MBD4O95243 USP9YP8-201ENST00000441913 500 ntBASIC2.71□□□□□ -1.98
MBD4O95243 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.71□□□□□ -1.98
MBD4O95243 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.71□□□□□ -1.98
MBD4O95243 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.71□□□□□ -1.98
MBD4O95243 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.71□□□□□ -1.98
MBD4O95243 RNU1-41P-201ENST00000516161 162 ntBASIC2.71□□□□□ -1.98
MBD4O95243 RNU1-48P-201ENST00000516400 162 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms