Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 RPL26P26-201ENST00000480251 434 ntBASIC3.36□□□□□ -1.87
FOXS1O43638 RPL23AP49-201ENST00000492925 468 ntBASIC3.36□□□□□ -1.87
FOXS1O43638 RNU6-1278P-201ENST00000516130 107 ntBASIC3.36□□□□□ -1.87
FOXS1O43638 RN7SKP49-201ENST00000516675 260 ntBASIC3.36□□□□□ -1.87
FOXS1O43638 RNU6-1183P-201ENST00000517054 60 ntBASIC3.36□□□□□ -1.87
FOXS1O43638 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.36□□□□□ -1.87
FOXS1O43638 U3.45-201ENST00000607547 219 ntBASIC3.36□□□□□ -1.87
FOXS1O43638 AL590240.4-201ENST00000616908 390 ntBASIC3.36□□□□□ -1.87
FOXS1O43638 U4.6-201ENST00000621618 127 ntBASIC3.36□□□□□ -1.87
FOXS1O43638 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.36□□□□□ -1.87
FOXS1O43638 AC021753.1-201ENST00000635724 168 ntBASIC3.36□□□□□ -1.87
FOXS1O43638 AC244205.2-202ENST00000635781 342 ntBASIC3.36□□□□□ -1.87
FOXS1O43638 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
FOXS1O43638 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXS1O43638 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
FOXS1O43638 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXS1O43638 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXS1O43638 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXS1O43638 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXS1O43638 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXS1O43638 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXS1O43638 RNU6-942P-201ENST00000363002 107 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 MIR518D-201ENST00000385014 87 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 UBA52P6-201ENST00000399822 382 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 RN7SKP177-201ENST00000410567 355 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXS1O43638 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXS1O43638 SSXP4-201ENST00000451349 245 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXS1O43638 U3.44-201ENST00000458938 192 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 AC087477.1-201ENST00000465747 340 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 AC084357.1-201ENST00000473404 255 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 RN7SL293P-201ENST00000481765 281 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXS1O43638 AC022559.1-201ENST00000520905 205 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXS1O43638 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXS1O43638 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXS1O43638 LINC00933-203ENST00000559812 219 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXS1O43638 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXS1O43638 AP003355.3-201ENST00000623465 114 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 U6.106-201ENST00000636360 105 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXS1O43638 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXS1O43638 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXS1O43638 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXS1O43638 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXS1O43638 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXS1O43638 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.35□□□□□ -1.87
FOXS1O43638 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXS1O43638 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
FOXS1O43638 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
FOXS1O43638 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
FOXS1O43638 AC090740.1-201ENST00000623193 2262 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXS1O43638 SNORA25.1-201ENST00000362326 128 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 RNU6-858P-201ENST00000362436 107 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 RNA5SP361-201ENST00000362686 118 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 Y_RNA.82-201ENST00000363000 102 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 Y_RNA.92-201ENST00000363043 102 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 Y_RNA.235-201ENST00000364412 102 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 Y_RNA.306-201ENST00000365015 102 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 Y_RNA.312-201ENST00000365089 102 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 Y_RNA.322-201ENST00000365151 102 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 SNORA29-201ENST00000384183 140 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 RNU6-21P-201ENST00000384710 107 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 Y_RNA.590-201ENST00000410140 107 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 RNA5SP44-201ENST00000410446 133 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 RNU6-651P-201ENST00000411040 105 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 RNU2-61P-201ENST00000411069 191 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 YME1L1P1-201ENST00000429435 297 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXS1O43638 MTATP6P7-201ENST00000453315 681 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 Y_RNA.650-201ENST00000459002 102 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 RPS29P26-201ENST00000477483 171 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 AC091874.1-201ENST00000511402 339 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 Y_RNA.777-201ENST00000516982 102 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 AC016256.1-201ENST00000547971 354 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 AC027288.2-201ENST00000553028 243 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 Y_RNA.771-201ENST00000598668 102 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 MIR7851-201ENST00000610611 160 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 AL391261.4-201ENST00000616012 481 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 Y_RNA.789-201ENST00000622480 102 ntBASIC3.34□□□□□ -1.87
FOXS1O43638 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
FOXS1O43638 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
FOXS1O43638 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.34□□□□□ -1.87
FOXS1O43638 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
FOXS1O43638 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.34□□□□□ -1.88
FOXS1O43638 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.34□□□□□ -1.88
FOXS1O43638 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
FOXS1O43638 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
FOXS1O43638 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
FOXS1O43638 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXS1O43638 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXS1O43638 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXS1O43638 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXS1O43638 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXS1O43638 UBE2WP1-201ENST00000362030 340 ntBASIC3.33□□□□□ -1.88
FOXS1O43638 RNA5SP502-201ENST00000362694 119 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 266.2 ms