Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 CYCSP26-201ENST00000534107 320 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 AC005562.2-201ENST00000618264 111 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 MIR3199-2-201ENST00000636243 86 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HOXA2O43364 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
HOXA2O43364 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA2O43364 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA2O43364 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXA2O43364 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXA2O43364 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA2O43364 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA2O43364 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA2O43364 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA2O43364 Y_RNA.243-201ENST00000364481 109 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 SNORD87-201ENST00000364849 89 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 RNU6-1180P-201ENST00000364935 107 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 RNU6-728P-201ENST00000365375 104 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 Y_RNA.521-201ENST00000384560 114 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 RNU6-476P-201ENST00000384726 107 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 RNU6-1228P-201ENST00000391014 107 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 RPL21P17-201ENST00000397467 475 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 VDAC1P3-201ENST00000434069 851 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 AL357134.1-201ENST00000445848 426 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 AC107626.1-201ENST00000471084 183 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXA2O43364 AC091167.1-201ENST00000492017 396 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 PARP4P3-201ENST00000510265 317 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 RNA5SP76-201ENST00000516277 87 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 AC090049.2-201ENST00000550377 109 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 uc_338.13-201ENST00000618243 179 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 MIR3653-201ENST00000625572 110 ntBASIC4.86□□□□□ -1.63
HOXA2O43364 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXA2O43364 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA2O43364 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA2O43364 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA2O43364 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA2O43364 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA2O43364 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA2O43364 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HOXA2O43364 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA2O43364 MIR367-201ENST00000362299 68 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 SNORA1.3-201ENST00000384676 136 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 RNY4P18-201ENST00000391107 89 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA2O43364 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA2O43364 RPS27P1-201ENST00000450552 247 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 AC105137.1-201ENST00000484355 562 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 RNU6-928P-201ENST00000516876 104 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 RNU1-117P-201ENST00000517041 158 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 AP003730.1-201ENST00000524605 285 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 AC025281.1-201ENST00000567026 265 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 MIR4724-201ENST00000579485 89 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 AC113403.1-201ENST00000604910 193 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 TCL6_2.1-201ENST00000615162 119 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 ADAM5-202ENST00000399789 1942 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA2O43364 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA2O43364 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA2O43364 AC004944.1-201ENST00000517807 3059 ntBASIC4.85□□□□□ -1.63
HOXA2O43364 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA2O43364 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA2O43364 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA2O43364 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA2O43364 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA2O43364 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HOXA2O43364 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HOXA2O43364 AL606845.1-201ENST00000404881 255 ntBASIC4.84□□□□□ -1.63
HOXA2O43364 RNU2-37P-201ENST00000410695 177 ntBASIC4.84□□□□□ -1.63
HOXA2O43364 AL365496.1-201ENST00000426885 215 ntBASIC4.84□□□□□ -1.63
HOXA2O43364 AC005300.1-201ENST00000428401 373 ntBASIC4.84□□□□□ -1.63
HOXA2O43364 AC012671.1-201ENST00000451912 203 ntBASIC4.84□□□□□ -1.63
HOXA2O43364 RNU7-141P-201ENST00000459304 62 ntBASIC4.84□□□□□ -1.63
HOXA2O43364 RNA5SP154-201ENST00000516193 111 ntBASIC4.84□□□□□ -1.63
HOXA2O43364 RNA5SP230-201ENST00000517039 122 ntBASIC4.84□□□□□ -1.63
HOXA2O43364 AL670379.2-201ENST00000604983 252 ntBASIC4.84□□□□□ -1.63
HOXA2O43364 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXA2O43364 ZYXP1-201ENST00000617638 118 ntBASIC4.84□□□□□ -1.63
HOXA2O43364 AC018692.3-201ENST00000623929 123 ntBASIC4.84□□□□□ -1.63
HOXA2O43364 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXA2O43364 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HOXA2O43364 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HOXA2O43364 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA2O43364 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
HOXA2O43364 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HOXA2O43364 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
HOXA2O43364 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HOXA2O43364 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
HOXA2O43364 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXA2O43364 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
HOXA2O43364 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXA2O43364 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA2O43364 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA2O43364 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA2O43364 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA2O43364 RNU6-1298P-201ENST00000362456 101 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 Y_RNA.229-201ENST00000364347 113 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 UBBP2-201ENST00000376781 231 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 RNU6-144P-201ENST00000383951 107 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 U1.1-201ENST00000384101 164 ntBASIC4.83□□□□□ -1.64
HOXA2O43364 RNU6-429P-201ENST00000384582 108 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms