Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ZNF658B-202ENST00000615961 3375 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.59□□□□□ -1.83
FOXN1O15353 Y_RNA.466-201ENST00000384294 113 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 AL160275.3-201ENST00000423876 471 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 PIGPP3-201ENST00000425307 415 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.59□□□□□ -1.83
FOXN1O15353 AL133396.1-201ENST00000432048 687 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 AL645939.1-201ENST00000453429 797 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 PCMTD1P1-201ENST00000455560 355 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.59□□□□□ -1.83
FOXN1O15353 RNU7-169P-201ENST00000459456 61 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.59□□□□□ -1.83
FOXN1O15353 RNA5SP445-201ENST00000515889 115 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 RNU6-397P-201ENST00000516226 104 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 RNU6-570P-201ENST00000517051 105 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.59□□□□□ -1.83
FOXN1O15353 AC068657.1-201ENST00000520807 306 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.59□□□□□ -1.83
FOXN1O15353 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.59□□□□□ -1.83
FOXN1O15353 AC090517.1-201ENST00000569307 266 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 AC006600.1-201ENST00000572529 153 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 AC004832.5-201ENST00000608677 401 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 SDR42E1P2-201ENST00000614861 481 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 SDR42E1P4-201ENST00000620894 481 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 U6.104-201ENST00000637979 90 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 AC241585.2-209ENST00000638217 143 ntBASIC3.59□□□□□ -1.83
FOXN1O15353 AL353746.1-201ENST00000566293 6881 ntBASIC3.59□□□□□ -1.84
FOXN1O15353 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
FOXN1O15353 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXN1O15353 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXN1O15353 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
FOXN1O15353 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
FOXN1O15353 RNA5SP383-201ENST00000362934 120 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 U3.6-201ENST00000363622 211 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 RNU6-371P-201ENST00000364283 108 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 U3.15-201ENST00000365398 212 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 SNORD73A-201ENST00000386062 65 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 RNU6-174P-201ENST00000410406 106 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 AC099677.1-201ENST00000420575 175 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 FTH1P6-201ENST00000430768 320 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 RNA5SP217-201ENST00000515959 91 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 RNA5SP458-201ENST00000516188 119 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 SNORA40.15-201ENST00000516884 107 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 RNU6-897P-201ENST00000517135 105 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 ERHP1-201ENST00000523006 310 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 CBX3P8-201ENST00000532412 525 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 MIR3186-201ENST00000577404 85 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 AC012433.1-201ENST00000588916 398 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 RNU6-85P-201ENST00000605989 107 ntBASIC3.58□□□□□ -1.84
FOXN1O15353 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.58□□□□□ -1.84
FOXN1O15353 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXN1O15353 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FOXN1O15353 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
FOXN1O15353 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXN1O15353 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
FOXN1O15353 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
FOXN1O15353 RNU6-288P-201ENST00000363690 104 ntBASIC3.57□□□□□ -1.84
FOXN1O15353 RNU6-837P-201ENST00000391056 108 ntBASIC3.57□□□□□ -1.84
FOXN1O15353 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.57□□□□□ -1.84
FOXN1O15353 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.57□□□□□ -1.84
FOXN1O15353 HMGN2P21-201ENST00000447764 270 ntBASIC3.57□□□□□ -1.84
FOXN1O15353 FCF1P4-201ENST00000448326 183 ntBASIC3.57□□□□□ -1.84
FOXN1O15353 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
FOXN1O15353 AC083906.5-201ENST00000503722 328 ntBASIC3.57□□□□□ -1.84
FOXN1O15353 RNU6-677P-201ENST00000516914 101 ntBASIC3.57□□□□□ -1.84
FOXN1O15353 RNU6-182P-201ENST00000516970 105 ntBASIC3.57□□□□□ -1.84
FOXN1O15353 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.57□□□□□ -1.84
FOXN1O15353 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.57□□□□□ -1.84
FOXN1O15353 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.57□□□□□ -1.84
FOXN1O15353 uc_338.25-201ENST00000613756 156 ntBASIC3.57□□□□□ -1.84
FOXN1O15353 MIR7153-201ENST00000637758 57 ntBASIC3.57□□□□□ -1.84
FOXN1O15353 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
FOXN1O15353 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
FOXN1O15353 MIR22-201ENST00000362190 85 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 RNY1P16-201ENST00000363063 111 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 RNU6-263P-201ENST00000363811 107 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 RNU6-596P-201ENST00000365395 98 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 Y_RNA.478-201ENST00000384358 107 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 SNORA51.11-201ENST00000384442 131 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 Y_RNA.518-201ENST00000384552 113 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 Y_RNA.555-201ENST00000384673 110 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 SNORA67.4-201ENST00000384688 142 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 SNORD15B-201ENST00000384714 146 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 MIR1287-201ENST00000408492 90 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.56□□□□□ -1.84
FOXN1O15353 RPL21P90-201ENST00000415692 466 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 AC244098.2-201ENST00000422068 99 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 MTCO1P39-201ENST00000426148 480 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 AC087499.2-201ENST00000432861 149 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 AC124916.1-201ENST00000444020 547 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 PRELID3BP1-201ENST00000457142 540 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 RPL21P41-201ENST00000459863 264 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 AP003733.2-201ENST00000529409 171 ntBASIC3.56□□□□□ -1.84
FOXN1O15353 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.56□□□□□ -1.84
FOXN1O15353 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.56□□□□□ -1.84
FOXN1O15353 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXN1O15353 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms