Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AL035666.1-201ENST00000446195 348 ntBASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 FTH1P25-201ENST00000447665 469 ntBASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 AC073415.1-201ENST00000449240 153 ntBASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 RNU7-180P-201ENST00000459240 63 ntBASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 RPS3AP17-201ENST00000472594 777 ntBASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 COPS8P3-201ENST00000526024 482 ntBASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 AC022254.1-201ENST00000567857 235 ntBASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 AC103810.8-201ENST00000607347 118 ntBASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 AC016717.2-201ENST00000609089 5141 ntBASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HMGB1P1B2RPK0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 RNA5SP479-201ENST00000364858 117 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 Y_RNA.296-201ENST00000364930 108 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 Y_RNA.359-201ENST00000365498 102 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 RNU6-378P-201ENST00000384324 107 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AL606923.1-201ENST00000406616 190 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 RN7SKP61-201ENST00000410642 295 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 RNU2-41P-201ENST00000410991 178 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AL353193.1-201ENST00000421444 268 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AC078809.1-201ENST00000427601 140 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AC091390.1-201ENST00000433904 331 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AL135938.1-201ENST00000443141 297 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 MTCO1P19-201ENST00000443487 500 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AC068587.1-201ENST00000483613 781 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AC011825.1-201ENST00000484967 388 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AC016632.1-201ENST00000503994 196 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 CCDC34P1-201ENST00000507441 517 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AC005741.1-201ENST00000511094 432 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 RNU6-1038P-201ENST00000516516 104 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 MTND4P7-201ENST00000523876 130 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AP000873.5-201ENST00000533906 236 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 SRGNP1-201ENST00000603392 451 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AC006023.1-201ENST00000603944 259 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AP001836.1-201ENST00000604675 523 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AL160394.1-201ENST00000624765 724 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 AP000553.5-201ENST00000641933 54 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 LINC02555-201ENST00000563933 1951 ntBASIC2.37□□□□□ -2.03
HMGB1P1B2RPK0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 RNU6-438P-201ENST00000365561 103 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 OR5H15-201ENST00000383696 930 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 RNU6-439P-201ENST00000384188 106 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 SNORA48.1-201ENST00000390879 135 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 AL360182.1-201ENST00000397433 468 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 AF228730.1-201ENST00000397972 663 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 MTCYBP2-201ENST00000407745 171 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 VN1R36P-201ENST00000414936 291 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 SRIP2-201ENST00000428470 166 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 AC132942.1-201ENST00000486753 483 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 AC079140.5-201ENST00000507882 310 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 RN7SKP24-201ENST00000515888 284 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 AC006362.1-201ENST00000567392 174 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 VN1R107P-201ENST00000601784 209 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 MIR1291-201ENST00000627649 87 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.36□□□□□ -2.03
HMGB1P1B2RPK0 MTND4P1-201ENST00000457501 1466 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 U3.9-201ENST00000363823 204 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 RNU5A-6P-201ENST00000384136 116 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 SNORD37.1-201ENST00000390968 65 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 RNU6-1158P-201ENST00000391167 107 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 AC139712.2-201ENST00000424302 339 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 MTCO2P19-201ENST00000427513 598 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 VN1R108P-201ENST00000431580 830 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 RNU6-333P-201ENST00000459117 107 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 AL163973.1-201ENST00000484753 577 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 RN7SKP298-201ENST00000515950 94 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 RNU1-40P-201ENST00000516816 164 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 RNU1-97P-201ENST00000516872 164 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 MIR4697-201ENST00000582977 78 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 Z98751.3-201ENST00000604447 521 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 HULC.1-201ENST00000612720 240 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 PCGEM1.1-201ENST00000613431 131 ntBASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGB1P1B2RPK0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms