Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 MIR30E-201ENST00000362104 92 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 SNORD50.1-201ENST00000362987 71 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 RNY1P16-201ENST00000363063 111 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-700P-201ENST00000391043 107 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 EI24P2-201ENST00000397776 1076 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 AL590004.1-201ENST00000405321 300 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 AC005326.1-201ENST00000429197 123 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 RPL21P10-201ENST00000463521 490 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 FO393415.2-201ENST00000480085 343 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 RPL36AP48-201ENST00000485521 314 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 AC090096.1-201ENST00000489168 390 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 AC022447.4-201ENST00000504053 364 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 RAC1P5-201ENST00000512182 576 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 SNORA70.18-201ENST00000516696 98 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-579P-201ENST00000516879 102 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 AC009812.2-201ENST00000517657 457 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 HSPE1P4-201ENST00000550617 308 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 HMGB1P24-202ENST00000615653 685 ntBASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA6Q9Y5G7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGA6Q9Y5G7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGA6Q9Y5G7 AL359854.1-201ENST00000614203 1594 ntBASIC3.34□□□□□ -1.88
PCDHGA6Q9Y5G7 AC068647.1-201ENST00000489539 2265 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 AC233981.2-201ENST00000611524 1614 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 MIR369-201ENST00000362155 70 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU4-35P-201ENST00000362588 141 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.202-201ENST00000364083 110 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.252-201ENST00000364556 101 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU4-56P-201ENST00000364700 142 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU6-968P-201ENST00000384076 107 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.428-201ENST00000384078 102 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.577-201ENST00000384794 101 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 U3.19-201ENST00000390893 196 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 SAR1AP2-201ENST00000392696 594 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 NDUFB4P4-201ENST00000404822 243 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 MTCYBP10-201ENST00000424905 650 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 BX679664.1-201ENST00000434429 253 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 AC244670.1-201ENST00000436879 112 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 MTCYBP6-201ENST00000441810 138 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 AC006539.3-201ENST00000454258 129 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 RPS29P12-201ENST00000460178 152 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 AP001324.2-201ENST00000461163 319 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 RPL31P41-201ENST00000477967 372 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 RPL30P10-201ENST00000488148 337 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU6-567P-201ENST00000516746 107 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 RN7SKP57-201ENST00000517248 293 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 IGHV3-76-201ENST00000522465 295 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 AP000889.1-201ENST00000530968 660 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 CBX3P8-201ENST00000532412 525 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 AC021231.3-201ENST00000558497 370 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 MIR3136-201ENST00000583498 78 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 AC022149.2-201ENST00000621061 203 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 MFSD8-233ENST00000641482 4860 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 AL353743.1-202ENST00000431724 1695 ntBASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA6Q9Y5G7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU4-9P-201ENST00000364951 139 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 AC117470.1-201ENST00000381974 330 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU6-1286P-201ENST00000383871 107 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.422-201ENST00000384054 114 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 SNORD17-201ENST00000390930 237 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 Z92545.1-201ENST00000411782 234 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 AC243428.1-201ENST00000421099 264 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 AC079354.2-201ENST00000453523 154 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 RPS4XP2-201ENST00000458402 793 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 RPL30P12-201ENST00000474666 353 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 RNA5SP112-201ENST00000515937 99 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 SNORD116.3-201ENST00000517176 78 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 AL590705.4-201ENST00000532209 134 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 AC079598.5-201ENST00000547460 117 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 AC006557.5-201ENST00000603126 811 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 AC005000.2-201ENST00000605468 310 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 YPEL5P2-201ENST00000605553 359 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 uc_338.22-201ENST00000622722 187 ntBASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHGA6Q9Y5G7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms