Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 Y_RNA.38-201ENST00000362617 102 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 RNU1-72P-201ENST00000362976 153 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 RNU5E-7P-201ENST00000365290 117 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 MIR221-201ENST00000385135 110 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 AL133475.1-201ENST00000404414 305 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 RNU4-53P-201ENST00000410828 140 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 RNU6-1068P-201ENST00000410958 103 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 TIMM9P3-201ENST00000428659 274 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 RPL23AP49-201ENST00000492925 468 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 RNU6-1038P-201ENST00000516516 104 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 AC090897.2-201ENST00000581715 130 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 MIR4424-201ENST00000585257 86 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 AC080078.2-201ENST00000603766 501 ntBASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.88□□□□□ -1.95
SMC4Q9NTJ3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 RNU4-20P-201ENST00000365601 151 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 Y_RNA.505-201ENST00000384489 102 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 RNU6-648P-201ENST00000410190 107 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 AL135786.1-201ENST00000415892 214 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 MTND1P4-201ENST00000435196 415 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 RNU7-167P-201ENST00000459160 62 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 AP000889.2-201ENST00000532684 490 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 AC023050.3-201ENST00000541142 333 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 AC121758.2-201ENST00000553271 193 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 PSMA3P-201ENST00000555485 635 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 AL118558.2-201ENST00000556294 238 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 MIR6715A-201ENST00000615929 79 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 U4.7-201ENST00000638126 106 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 MTND5P6-201ENST00000422338 1798 ntBASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMC4Q9NTJ3 RNU1-57P-201ENST00000384491 166 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 RNU6-908P-201ENST00000410160 94 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 Y_RNA.619-201ENST00000410951 90 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 SNORA25.17-201ENST00000517184 124 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 AP003033.1-201ENST00000527244 415 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 PRELID2P1-201ENST00000552837 301 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 AL133241.1-201ENST00000556832 487 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 AL138976.2-201ENST00000563989 694 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 SNORD53-201ENST00000579969 78 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 AC073410.2-201ENST00000603240 332 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 MIR6895-201ENST00000613497 78 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 U4atac.1-201ENST00000618345 95 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 MIR5739-201ENST00000619803 80 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 AP003400.5-201ENST00000624827 617 ntBASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
SMC4Q9NTJ3 RNA5SP240-201ENST00000365355 128 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 MIR181A1-201ENST00000385026 110 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 MIR95-201ENST00000385072 81 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 RNU2-23P-201ENST00000410545 195 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 MTND3P21-201ENST00000433774 331 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC011753.1-201ENST00000451001 220 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 snoU13.14-201ENST00000459372 104 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 DYNLL1P5-201ENST00000467158 270 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AF213884.2-201ENST00000510417 903 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC107222.1-201ENST00000510899 637 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC011352.1-201ENST00000512300 793 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 RNU6-718P-201ENST00000516166 105 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 RNU6-1281P-201ENST00000516223 105 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC109479.2-201ENST00000517842 174 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 MIR4658-201ENST00000584344 65 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC009233.1-201ENST00000616477 371 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 uc_338.34-201ENST00000617467 174 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC027514.1-201ENST00000588561 1603 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 AC002543.1-201ENST00000299783 1954 ntBASIC2.85□□□□□ -1.95
SMC4Q9NTJ3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SMC4Q9NTJ3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 326.8 ms