Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL121917.1-203ENST00000605534 577 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 U2.14-201ENST00000615943 113 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 AL590240.4-201ENST00000616908 390 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 FP236240.3-201ENST00000623061 327 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 Z75746.1-201ENST00000440243 2080 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 AC068647.1-201ENST00000489539 2265 ntBASIC3.65□□□□□ -1.83
VPS11Q9H270 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS11Q9H270 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS11Q9H270 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS11Q9H270 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS11Q9H270 ZNF826P-207ENST00000622273 1910 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 AC010680.1-201ENST00000590024 3590 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS11Q9H270 MIR372-201ENST00000362225 67 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 Y_RNA.27-201ENST00000362540 103 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 RNU6-595P-201ENST00000363944 107 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 RNU6-102P-201ENST00000384485 104 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VPS11Q9H270 RNA5SP252-201ENST00000391131 119 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 AL513475.1-201ENST00000406602 315 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS11Q9H270 AL117339.2-201ENST00000430475 180 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 HMGB3P8-201ENST00000449709 577 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 snoU13.28-201ENST00000459235 104 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS11Q9H270 AC087190.1-201ENST00000484462 480 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 AC107032.1-201ENST00000485945 480 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 RNU6-579P-201ENST00000516879 102 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 AC136624.4-201ENST00000573044 370 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 MIR5696-201ENST00000578474 85 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 MIR1273C-201ENST00000578669 77 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 LRRC37A5P-203ENST00000580181 585 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 SNORA51-201ENST00000606420 132 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 SNORA50A-202ENST00000629536 136 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 U6.92-201ENST00000636464 89 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 MIR7153-201ENST00000637758 57 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 ZNF299P-201ENST00000406845 1804 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 AL021368.2-201ENST00000606125 5352 ntBASIC3.64□□□□□ -1.83
VPS11Q9H270 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS11Q9H270 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS11Q9H270 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS11Q9H270 ZNF285B-201ENST00000561698 1767 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS11Q9H270 MIR30E-201ENST00000362104 92 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 RNU6-1290P-201ENST00000362957 109 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 RNU6-1317P-201ENST00000364582 104 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 SNORA14A-201ENST00000364773 135 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 Y_RNA.581-201ENST00000391017 97 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 RPS29P13-201ENST00000402041 169 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 AL591034.2-201ENST00000402839 359 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 RNU2-20P-201ENST00000410425 191 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 RNU6-735P-201ENST00000410612 107 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 AC017079.2-201ENST00000416102 485 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.63□□□□□ -1.83
VPS11Q9H270 AC034236.1-201ENST00000469891 373 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 AC110768.1-201ENST00000509222 400 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS11Q9H270 AC069113.1-201ENST00000517763 267 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS11Q9H270 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS11Q9H270 AL157871.3-201ENST00000557231 293 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 OR1M4P-201ENST00000589199 287 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 AC099778.2-201ENST00000610904 211 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS11Q9H270 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS11Q9H270 AP000553.6-201ENST00000641242 118 ntBASIC3.63□□□□□ -1.83
VPS11Q9H270 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS11Q9H270 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS11Q9H270 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS11Q9H270 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS11Q9H270 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS11Q9H270 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
VPS11Q9H270 HAUS6P2-201ENST00000433254 2404 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS11Q9H270 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
VPS11Q9H270 LINC02555-201ENST00000563933 1951 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
VPS11Q9H270 RNU1-75P-201ENST00000347264 129 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 AP002088.1-201ENST00000382740 395 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 RNU6-198P-201ENST00000384258 104 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 RNU6-804P-201ENST00000384286 107 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 RNA5SP494-201ENST00000410653 129 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 RNU6-607P-201ENST00000411283 108 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 Y_RNA.626-201ENST00000411288 95 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 AC007098.1-201ENST00000420122 367 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 AC092017.2-201ENST00000427600 362 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 AC091286.1-201ENST00000431233 461 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 AL513124.1-201ENST00000450410 614 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 AC092798.1-201ENST00000458542 409 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.62□□□□□ -1.83
VPS11Q9H270 MRPS36P4-201ENST00000534436 298 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 AC010186.2-204ENST00000537668 439 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 SNORD39.4-201ENST00000620099 78 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VPS11Q9H270 U2.21-201ENST00000637295 81 ntBASIC3.62□□□□□ -1.83
VPS11Q9H270 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS11Q9H270 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS11Q9H270 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 360.9 ms