Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC012467.1-201ENST00000607740 256 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.97□□□□□ -2.25
TRIM4Q9C037 AL078604.3-201ENST00000615580 211 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 AC104985.3-201ENST00000623479 597 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 AC022513.1-201ENST00000624512 117 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 MIR1248-201ENST00000629190 106 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 MTND5P33-201ENST00000571250 1450 ntBASIC0.97□□□□□ -2.25
TRIM4Q9C037 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.96□□□□□ -2.26
TRIM4Q9C037 Y_RNA.85-201ENST00000363014 111 ntBASIC0.96□□□□□ -2.26
TRIM4Q9C037 RNU5B-4P-201ENST00000363508 111 ntBASIC0.96□□□□□ -2.26
TRIM4Q9C037 CBX3P9-201ENST00000402326 552 ntBASIC0.96□□□□□ -2.26
TRIM4Q9C037 AL022238.1-201ENST00000442557 355 ntBASIC0.96□□□□□ -2.26
TRIM4Q9C037 NEFMP1-201ENST00000443423 1006 ntBASIC0.96□□□□□ -2.26
TRIM4Q9C037 MTND2P4-201ENST00000445034 1004 ntBASIC0.96□□□□□ -2.26
TRIM4Q9C037 AL606517.1-201ENST00000446914 387 ntBASIC0.96□□□□□ -2.26
TRIM4Q9C037 AC027338.1-201ENST00000514840 825 ntBASIC0.96□□□□□ -2.26
TRIM4Q9C037 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TRIM4Q9C037 AC036111.3-201ENST00000526389 112 ntBASIC0.96□□□□□ -2.26
TRIM4Q9C037 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.96□□□□□ -2.26
TRIM4Q9C037 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.96□□□□□ -2.26
TRIM4Q9C037 AP000860.1-201ENST00000605250 559 ntBASIC0.96□□□□□ -2.26
TRIM4Q9C037 AL590240.4-201ENST00000616908 390 ntBASIC0.96□□□□□ -2.26
TRIM4Q9C037 ICE2P2-201ENST00000483823 2787 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 RNA5SP327-201ENST00000362494 101 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 RNU6-112P-201ENST00000363599 104 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.95□□□□□ -2.26
TRIM4Q9C037 RNU6-160P-201ENST00000384591 107 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 MIR301A-201ENST00000385261 86 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 RNU6-817P-201ENST00000391083 104 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC083875.1-201ENST00000419509 405 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.95□□□□□ -2.26
TRIM4Q9C037 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.95□□□□□ -2.26
TRIM4Q9C037 CBX3P6-201ENST00000430257 527 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC027119.1-201ENST00000440877 241 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 AP000542.1-201ENST00000448473 371 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC012308.1-201ENST00000451232 178 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 AL353752.1-201ENST00000454946 260 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.95□□□□□ -2.26
TRIM4Q9C037 RNA5SP395-201ENST00000516567 118 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC007363.1-201ENST00000604736 620 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC012676.2-201ENST00000619258 186 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC130454.1-201ENST00000622948 401 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 MIR924-201ENST00000638017 53 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC009541.1-201ENST00000438279 2662 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC018630.2-201ENST00000534866 2403 ntBASIC0.95□□□□□ -2.26
TRIM4Q9C037 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.94□□□□□ -2.26
TRIM4Q9C037 RNU6-487P-201ENST00000365430 104 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 RNU6-622P-201ENST00000384272 103 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 MIR29B2-201ENST00000385055 81 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 RNU6-1025P-201ENST00000410629 104 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 RPL21P90-201ENST00000415692 466 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.94□□□□□ -2.26
TRIM4Q9C037 AL358176.2-201ENST00000425769 204 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 AL669831.1-202ENST00000428504 417 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.94□□□□□ -2.26
TRIM4Q9C037 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.94□□□□□ -2.26
TRIM4Q9C037 PRPS1P1-201ENST00000445305 876 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 PAXBP1P1-201ENST00000449315 447 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.94□□□□□ -2.26
TRIM4Q9C037 MTND1P36-201ENST00000522384 936 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 MIR4698-201ENST00000577795 80 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.94□□□□□ -2.26
TRIM4Q9C037 AC078795.2-201ENST00000602835 1252 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 AC018926.1-201ENST00000616335 435 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 AC068205.3-201ENST00000636385 468 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 AC006927.2-201ENST00000639256 389 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 AL391516.1-201ENST00000554380 2449 ntBASIC0.94□□□□□ -2.26
TRIM4Q9C037 snoU2_19.1-201ENST00000362361 80 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 SNORD114-23-201ENST00000363536 72 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 SNORD114-6-201ENST00000364393 72 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRIM4Q9C037 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRIM4Q9C037 FCF1P10-201ENST00000407590 479 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 AL359704.1-201ENST00000411586 781 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.93□□□□□ -2.26
TRIM4Q9C037 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.93□□□□□ -2.26
TRIM4Q9C037 AC139712.2-201ENST00000424302 339 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.93□□□□□ -2.26
TRIM4Q9C037 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.93□□□□□ -2.26
TRIM4Q9C037 USP9YP17-201ENST00000444617 696 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 EEF1E1P1-201ENST00000446998 430 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
TRIM4Q9C037 ZNF886P-201ENST00000450781 723 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 AC130509.1-201ENST00000464158 433 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 RPL26P26-201ENST00000480251 434 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 AP001025.1-201ENST00000486139 332 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
TRIM4Q9C037 HMGN1P13-201ENST00000505795 138 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 AC108078.1-201ENST00000508073 725 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.93□□□□□ -2.26
TRIM4Q9C037 OR8K2P-201ENST00000524645 927 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 TRAV32-201ENST00000553993 340 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 AL136520.1-202ENST00000555494 763 ntBASIC0.93□□□□□ -2.26
TRIM4Q9C037 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms