Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXP3Q9BZS1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 RNA5SP124-201ENST00000362739 110 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 RNU6-527P-201ENST00000363425 104 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 RNU6-290P-201ENST00000365212 101 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 RNU6-102P-201ENST00000384485 104 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 PCNPP3-201ENST00000393579 471 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 EIF1AXP1-201ENST00000419267 435 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 AC002075.2-201ENST00000425207 252 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 EIF1P2-201ENST00000428233 350 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 AL133547.1-201ENST00000448546 220 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 MTATP6P7-201ENST00000453315 681 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 HSPE1P25-201ENST00000455484 251 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 AL049830.2-201ENST00000480072 201 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 RNA5SP179-201ENST00000517284 121 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 LINC00933-203ENST00000559812 219 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 AC011476.5-201ENST00000615594 130 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 AL391261.4-201ENST00000616012 481 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 U7.8-201ENST00000619968 63 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 AL354798.1-201ENST00000622505 329 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 AC097372.5-201ENST00000623665 376 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 U2.22-201ENST00000636441 106 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 AC012442.3-202ENST00000636742 206 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 U2.21-201ENST00000637295 81 ntBASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
FOXP3Q9BZS1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 FTLP6-201ENST00000355274 422 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 RNU6-942P-201ENST00000363002 107 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 Y_RNA.83-201ENST00000363005 113 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 SNORA70.4-201ENST00000365509 134 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 MIR325-201ENST00000385260 98 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 RNU1-139P-201ENST00000391307 165 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 HSPE1P26-201ENST00000405341 275 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 AC016700.2-201ENST00000446011 156 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 AL353705.4-201ENST00000449661 238 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 RPL30P1-201ENST00000488676 339 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 RNA5SP164-201ENST00000516533 110 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 RN7SKP272-201ENST00000516988 232 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 AL121772.2-201ENST00000614331 297 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 AC127459.3-201ENST00000624328 466 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 U6.98-201ENST00000637157 84 ntBASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXP3Q9BZS1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.9□□□□□ -1.78
FOXP3Q9BZS1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.9□□□□□ -1.78
FOXP3Q9BZS1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
FOXP3Q9BZS1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
FOXP3Q9BZS1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
FOXP3Q9BZS1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 AL157777.2-201ENST00000258070 137 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 RNU4-90P-201ENST00000362773 141 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 RNA5SP387-201ENST00000364226 106 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 RNU6-217P-201ENST00000384164 104 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 RNU6-318P-201ENST00000384283 103 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 RNA5SP213-201ENST00000391031 106 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 Z98941.1-201ENST00000407764 100 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 AC243964.1-201ENST00000441814 261 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 AL031659.1-201ENST00000447075 539 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 Y_RNA.644-201ENST00000459006 113 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 RPL30P5-201ENST00000494923 336 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 AC078918.1-201ENST00000498515 228 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 AC005921.1-201ENST00000510589 286 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 Y_RNA.674-201ENST00000516362 113 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 RNU6-1282P-201ENST00000516735 96 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 CBX3P4-201ENST00000538909 354 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 H3F3AP1-201ENST00000559984 334 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 KLKP1-201ENST00000595979 403 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 FTX_3.1-201ENST00000610451 147 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 AC006504.1-201ENST00000562493 3666 ntBASIC3.9□□□□□ -1.79
FOXP3Q9BZS1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 MIR208A-201ENST00000362287 71 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 RNU6-213P-201ENST00000384051 104 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 RNU6-746P-201ENST00000384112 109 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 Y_RNA.464-201ENST00000384282 110 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 MIR30B-201ENST00000384850 88 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 MIR32-201ENST00000384965 70 ntBASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXP3Q9BZS1 RNA5SP44-201ENST00000410446 133 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms