Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 RNU7-4P-201ENST00000516961 62 ntBASIC2.76□□□□□ -1.97
NPIPB3Q92617 Y_RNA.711-201ENST00000516993 102 ntBASIC2.76□□□□□ -1.97
NPIPB3Q92617 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.76□□□□□ -1.97
NPIPB3Q92617 AC093331.1-201ENST00000521474 169 ntBASIC2.76□□□□□ -1.97
NPIPB3Q92617 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NPIPB3Q92617 AC023442.1-201ENST00000531247 422 ntBASIC2.76□□□□□ -1.97
NPIPB3Q92617 AC027176.1-201ENST00000560204 514 ntBASIC2.76□□□□□ -1.97
NPIPB3Q92617 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.76□□□□□ -1.97
NPIPB3Q92617 AL034555.1-201ENST00000604816 211 ntBASIC2.76□□□□□ -1.97
NPIPB3Q92617 AC100812.1-201ENST00000607622 580 ntBASIC2.76□□□□□ -1.97
NPIPB3Q92617 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.76□□□□□ -1.97
NPIPB3Q92617 AC007742.2-201ENST00000618226 398 ntBASIC2.76□□□□□ -1.97
NPIPB3Q92617 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
NPIPB3Q92617 AL450472.1-202ENST00000637286 180 ntBASIC2.76□□□□□ -1.97
NPIPB3Q92617 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.76□□□□□ -1.97
NPIPB3Q92617 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
NPIPB3Q92617 AL079305.1-201ENST00000623159 3008 ntBASIC2.76□□□□□ -1.97
NPIPB3Q92617 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NPIPB3Q92617 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.75□□□□□ -1.97
NPIPB3Q92617 AL513302.2-201ENST00000562313 1842 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
NPIPB3Q92617 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NPIPB3Q92617 SNORA36A-201ENST00000384221 132 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 SNORA12.2-201ENST00000391040 156 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 RNU6-1156P-201ENST00000410365 100 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 AC016769.2-201ENST00000414815 475 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 EIF4EP4-201ENST00000424916 578 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 AC008267.5-201ENST00000424928 265 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 RPS29P7-201ENST00000439662 171 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 AC009220.1-201ENST00000451614 275 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 AC006539.3-201ENST00000454258 129 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 AC010401.1-201ENST00000463867 348 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 RPL23AP67-201ENST00000465341 474 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 AC087477.1-201ENST00000465747 340 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 HMGB1P35-201ENST00000503360 598 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 PHBP14-201ENST00000512887 367 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.75□□□□□ -1.97
NPIPB3Q92617 SNORA31.16-201ENST00000516773 139 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 Y_RNA.706-201ENST00000516933 99 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 RNU6-988P-201ENST00000519081 107 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 AP003072.1-201ENST00000531740 145 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 ELOCP31-201ENST00000540463 467 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.75□□□□□ -1.97
NPIPB3Q92617 MIR5685-201ENST00000579080 79 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 Z98751.3-201ENST00000604447 521 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 RMST_6.1-201ENST00000611980 203 ntBASIC2.75□□□□□ -1.97
NPIPB3Q92617 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.75□□□□□ -1.97
NPIPB3Q92617 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NPIPB3Q92617 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
NPIPB3Q92617 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.75□□□□□ -1.97
NPIPB3Q92617 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.75□□□□□ -1.97
NPIPB3Q92617 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NPIPB3Q92617 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
NPIPB3Q92617 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPIPB3Q92617 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
NPIPB3Q92617 Y_RNA.202-201ENST00000364083 110 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 RNU1-115P-201ENST00000365329 160 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 AP002088.1-201ENST00000382740 395 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 CBX3P9-201ENST00000402326 552 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 AL590004.1-201ENST00000405321 300 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 PMCHL1-202ENST00000423102 261 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 AC012306.1-201ENST00000423267 114 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 AP000907.1-201ENST00000428428 510 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 AC092423.1-201ENST00000430165 186 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 AL445584.1-201ENST00000431451 330 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 BX679664.1-201ENST00000434429 253 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 AL163540.1-201ENST00000485382 386 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 AC021146.2-201ENST00000504736 556 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 AC110768.1-201ENST00000509222 400 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 AC026402.1-201ENST00000513642 170 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.74□□□□□ -1.97
NPIPB3Q92617 RN7SKP295-201ENST00000517264 153 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 AC107934.2-201ENST00000518653 310 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.74□□□□□ -1.97
NPIPB3Q92617 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.74□□□□□ -1.97
NPIPB3Q92617 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.74□□□□□ -1.97
NPIPB3Q92617 RN7SL703P-201ENST00000578485 302 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.74□□□□□ -1.97
NPIPB3Q92617 Y_RNA.812-201ENST00000610788 101 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 Y_RNA.784-201ENST00000613803 101 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 Y_RNA.787-201ENST00000616522 101 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 Y_RNA.780-201ENST00000617336 101 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.74□□□□□ -1.97
NPIPB3Q92617 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 Y_RNA.801-201ENST00000619005 101 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 MIR7153-201ENST00000637758 57 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 AC119674.1-207ENST00000641355 633 ntBASIC2.74□□□□□ -1.97
NPIPB3Q92617 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPIPB3Q92617 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
NPIPB3Q92617 Y_RNA.28-201ENST00000362554 111 ntBASIC2.73□□□□□ -1.97
NPIPB3Q92617 Y_RNA.31-201ENST00000362574 102 ntBASIC2.73□□□□□ -1.97
NPIPB3Q92617 RNU6-1159P-201ENST00000362933 107 ntBASIC2.73□□□□□ -1.97
NPIPB3Q92617 Y_RNA.314-201ENST00000365114 102 ntBASIC2.73□□□□□ -1.97
NPIPB3Q92617 Y_RNA.405-201ENST00000383979 100 ntBASIC2.73□□□□□ -1.97
NPIPB3Q92617 Y_RNA.451-201ENST00000384200 100 ntBASIC2.73□□□□□ -1.97
NPIPB3Q92617 Y_RNA.524-201ENST00000384564 100 ntBASIC2.73□□□□□ -1.97
NPIPB3Q92617 Y_RNA.561-201ENST00000384694 100 ntBASIC2.73□□□□□ -1.97
NPIPB3Q92617 MIR141-201ENST00000384975 95 ntBASIC2.73□□□□□ -1.97
NPIPB3Q92617 MIR153-2-201ENST00000385225 87 ntBASIC2.73□□□□□ -1.97
NPIPB3Q92617 RNU6-308P-201ENST00000390957 107 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms