Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 PSMA3P-201ENST00000555485 635 ntBASIC1.54□□□□□ -2.16
LINC01560Q8TB33 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.54□□□□□ -2.16
LINC01560Q8TB33 AC009127.3-201ENST00000570531 403 ntBASIC1.54□□□□□ -2.16
LINC01560Q8TB33 MIR4781-201ENST00000585250 76 ntBASIC1.54□□□□□ -2.16
LINC01560Q8TB33 RPL30P11-203ENST00000598995 310 ntBASIC1.54□□□□□ -2.16
LINC01560Q8TB33 AC073410.2-201ENST00000603240 332 ntBASIC1.54□□□□□ -2.16
LINC01560Q8TB33 AL355297.2-201ENST00000604792 129 ntBASIC1.54□□□□□ -2.16
LINC01560Q8TB33 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LINC01560Q8TB33 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.54□□□□□ -2.16
LINC01560Q8TB33 AL158063.1-201ENST00000615349 536 ntBASIC1.54□□□□□ -2.16
LINC01560Q8TB33 U4atac.1-201ENST00000618345 95 ntBASIC1.54□□□□□ -2.16
LINC01560Q8TB33 AC026585.1-201ENST00000619582 524 ntBASIC1.54□□□□□ -2.16
LINC01560Q8TB33 MIR203B-201ENST00000636080 86 ntBASIC1.54□□□□□ -2.16
LINC01560Q8TB33 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.54□□□□□ -2.16
LINC01560Q8TB33 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LINC01560Q8TB33 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LINC01560Q8TB33 HAUS6P2-201ENST00000433254 2404 ntBASIC1.54□□□□□ -2.16
LINC01560Q8TB33 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC131280.1-202ENST00000624067 4211 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 RNU6-661P-201ENST00000362409 107 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 SNORA16.1-201ENST00000364597 132 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 RNU6-1303P-201ENST00000364841 107 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 RNU6-715P-201ENST00000365204 103 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 RNA5SP37-201ENST00000365420 130 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 U8.10-201ENST00000384260 133 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 RN7SKP158-201ENST00000410453 326 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 HMGB3P2-201ENST00000411913 584 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 MTCO2P34-201ENST00000421994 607 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 MTND4P32-201ENST00000437189 1237 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AL161788.1-201ENST00000441805 169 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 RNU7-182P-201ENST00000459009 62 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC090255.1-201ENST00000495779 349 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 RNU6-1178P-201ENST00000516674 107 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 RNU7-193P-201ENST00000516723 65 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 RNA5SP503-201ENST00000517047 117 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 RNU6-430P-201ENST00000517078 107 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 CYCSP26-201ENST00000534107 320 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AL138976.2-201ENST00000563989 694 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC093249.1-201ENST00000567049 203 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 MIR4528-201ENST00000577763 90 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC090897.2-201ENST00000581715 130 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC087752.4-201ENST00000605911 462 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 snoU13.31-201ENST00000607291 104 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC008147.4-201ENST00000617570 1204 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC136475.10-201ENST00000620253 385 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 Z69908.1-201ENST00000622603 247 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC012640.5-201ENST00000623897 319 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 AC009161.2-201ENST00000624626 138 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01560Q8TB33 SEPT14P19-203ENST00000633205 211 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 MIR3974-201ENST00000637126 96 ntBASIC1.53□□□□□ -2.16
LINC01560Q8TB33 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AL596028.1-201ENST00000326971 197 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 RNU6-78P-201ENST00000362897 107 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 SNORD56.1-201ENST00000362913 68 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 RNU1-23P-201ENST00000363361 144 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 RNU4-48P-201ENST00000365559 182 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 SNORA75-201ENST00000384158 137 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AC090960.1-201ENST00000421072 306 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 HMGN2P38-201ENST00000423806 265 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 MTCO2P11-201ENST00000431069 680 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AL596276.1-201ENST00000434465 418 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AC132479.1-201ENST00000449160 144 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AC012308.1-201ENST00000451232 178 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 C1DP4-201ENST00000455429 424 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 CYP2C59P-201ENST00000457790 269 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AC018868.1-201ENST00000491307 315 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 ARL2BPP4-201ENST00000506854 471 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 RNU2-53P-201ENST00000516257 147 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AC007375.1-201ENST00000554513 578 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AC025449.1-201ENST00000603896 529 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 AC022202.1-201ENST00000613515 211 ntBASIC1.52□□□□□ -2.17
LINC01560Q8TB33 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms