Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AIMP1P2-201ENST00000425294 312 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 RN7SL329P-201ENST00000467740 299 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 RNU1-6P-201ENST00000516290 144 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 AP001880.2-201ENST00000538233 448 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 NDUFA5P6-201ENST00000542110 379 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 MIR5582-201ENST00000579697 68 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 RN7SL176P-201ENST00000580352 264 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 AL670379.3-201ENST00000605040 251 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 AC087385.3-201ENST00000620477 187 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 AC018692.3-201ENST00000623929 123 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 U6.115-201ENST00000636045 103 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 AC068647.2-201ENST00000637380 353 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AL672167.1-203ENST00000641299 2975 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 ZNF137P-201ENST00000456718 1920 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 RNU1-83P-201ENST00000363426 164 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 RNU6-597P-201ENST00000365620 102 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 PTMAP5-201ENST00000393073 333 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AL590762.2-201ENST00000395798 571 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 RNA5SP504-201ENST00000410676 117 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AL591419.1-201ENST00000427423 339 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 RN7SL826P-201ENST00000479724 288 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AC093270.2-201ENST00000486157 792 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AC146944.2-203ENST00000502493 354 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AC139495.1-202ENST00000513164 354 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AC021739.1-201ENST00000559631 174 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AC027176.1-201ENST00000560204 514 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 HSPE1P5-201ENST00000561489 272 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AC120024.3-201ENST00000603167 156 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AL034555.1-201ENST00000604816 211 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 uc_338.32-201ENST00000615087 172 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AC005562.2-201ENST00000618264 111 ntBASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC116Q8IYX3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 Y_RNA.361-201ENST00000365515 120 ntBASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 RNY3P5-201ENST00000384127 102 ntBASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 CYCSP48-201ENST00000417124 323 ntBASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AC027124.2-201ENST00000428249 105 ntBASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AC068287.1-201ENST00000430283 295 ntBASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AL772161.1-201ENST00000439130 476 ntBASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AC004386.2-201ENST00000441858 148 ntBASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AC025281.1-201ENST00000567026 265 ntBASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 MIR3934-201ENST00000579806 107 ntBASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AL031274.2-201ENST00000599419 203 ntBASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 AC025754.2-201ENST00000606491 432 ntBASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CCDC116Q8IYX3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 MAPK10-263ENST00000641052 4307 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 SNORA7.2-201ENST00000364446 145 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 RNA5SP113-201ENST00000410486 84 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 RPS26P2-201ENST00000440331 348 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 RN7SL132P-201ENST00000478131 296 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 SCARNA22-201ENST00000503991 125 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 RN7SKP46-201ENST00000515942 234 ntBASIC4.43□□□□□ -1.7
CCDC116Q8IYX3 Y_RNA.692-201ENST00000516627 105 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms