Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 RN7SKP153-201ENST00000365026 316 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 SNORD38B-201ENST00000384690 67 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 MIR130B-202ENST00000385018 82 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 MIR23A-201ENST00000385245 73 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 SNORA75.1-201ENST00000391130 148 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 RNA5SP129-201ENST00000410276 118 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 RNU4-64P-201ENST00000410795 131 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 AL606517.2-201ENST00000442855 241 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 RNA5SP310-201ENST00000459084 116 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 RNU7-106P-201ENST00000459514 67 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 RPS29P12-201ENST00000460178 152 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 RN7SL303P-201ENST00000469773 251 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 RN7SL466P-201ENST00000497546 295 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 BX510359.5-201ENST00000515651 304 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 Y_RNA.667-201ENST00000516212 107 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 RNA5SP137-201ENST00000516833 135 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 MIR3691-201ENST00000578066 90 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 MIR3135A-201ENST00000578460 77 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 Six3os1_4.1-201ENST00000615706 324 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 MIR6076-201ENST00000617521 113 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 MIR6085-201ENST00000618314 110 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 AC007318.2-201ENST00000620999 243 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 TRDV1-202ENST00000621643 102 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 SNORD38B-202ENST00000625943 69 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 SNORA16A-202ENST00000628458 135 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 ZNF700-201ENST00000254321 2882 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 AL359851.1-201ENST00000569460 4997 ntBASIC2.09□□□□□ -2.08
LCE4AQ5TA78 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC2.09□□□□□ -2.08
LCE4AQ5TA78 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 AC009779.8-201ENST00000641684 4384 ntBASIC2.08□□□□□ -2.08
LCE4AQ5TA78 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 RNA5SP273-201ENST00000362484 113 ntBASIC2.08□□□□□ -2.08
LCE4AQ5TA78 RNU6-1083P-201ENST00000384022 107 ntBASIC2.08□□□□□ -2.08
LCE4AQ5TA78 U8.16-201ENST00000391279 133 ntBASIC2.08□□□□□ -2.08
LCE4AQ5TA78 AL590143.1-201ENST00000405071 138 ntBASIC2.08□□□□□ -2.08
LCE4AQ5TA78 AL359092.1-201ENST00000417156 265 ntBASIC2.08□□□□□ -2.08
LCE4AQ5TA78 RN7SL187P-201ENST00000495587 303 ntBASIC2.08□□□□□ -2.08
LCE4AQ5TA78 RN7SKP238-201ENST00000516483 249 ntBASIC2.08□□□□□ -2.08
LCE4AQ5TA78 RNA5SP438-201ENST00000516561 112 ntBASIC2.08□□□□□ -2.08
LCE4AQ5TA78 Y_RNA.697-201ENST00000516776 113 ntBASIC2.08□□□□□ -2.08
LCE4AQ5TA78 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 MIR6127-201ENST00000614019 109 ntBASIC2.08□□□□□ -2.08
LCE4AQ5TA78 MIR6715B-201ENST00000637172 77 ntBASIC2.08□□□□□ -2.08
LCE4AQ5TA78 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.08□□□□□ -2.08
LCE4AQ5TA78 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms