Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 MIR3529-201ENST00000637713 78 ntBASIC5.53□□□□□ -1.52
PRIM1P49642 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PRIM1P49642 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.53□□□□□ -1.52
PRIM1P49642 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.53□□□□□ -1.52
PRIM1P49642 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.53□□□□□ -1.52
PRIM1P49642 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
PRIM1P49642 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRIM1P49642 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.52□□□□□ -1.53
PRIM1P49642 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRIM1P49642 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.52□□□□□ -1.53
PRIM1P49642 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.52□□□□□ -1.53
PRIM1P49642 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.52□□□□□ -1.53
PRIM1P49642 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.52□□□□□ -1.53
PRIM1P49642 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRIM1P49642 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PRIM1P49642 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PRIM1P49642 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
PRIM1P49642 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PRIM1P49642 Y_RNA.287-201ENST00000364853 94 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 Y_RNA.329-201ENST00000365209 107 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 RNU1-100P-201ENST00000365255 165 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 MIR626-201ENST00000385032 94 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 HMGB1P37-201ENST00000439613 609 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.52□□□□□ -1.53
PRIM1P49642 RNU6-659P-201ENST00000516454 104 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 AP004242.1-201ENST00000533701 349 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 AC109810.1-201ENST00000534066 224 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 AC020895.1-201ENST00000595362 272 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 SNRPGP20-201ENST00000604477 205 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 FTX_3.1-201ENST00000610451 147 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 AL121772.2-201ENST00000614331 297 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 U2.21-201ENST00000637295 81 ntBASIC5.52□□□□□ -1.53
PRIM1P49642 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRIM1P49642 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRIM1P49642 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRIM1P49642 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRIM1P49642 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRIM1P49642 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.52□□□□□ -1.53
PRIM1P49642 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PRIM1P49642 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.51□□□□□ -1.53
PRIM1P49642 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PRIM1P49642 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.51□□□□□ -1.53
PRIM1P49642 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
PRIM1P49642 RNU6-1285P-201ENST00000363480 105 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 RNU6-1264P-201ENST00000383891 107 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 RNU1-73P-201ENST00000383971 164 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 SNORA68.2-201ENST00000391263 128 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 HDGFP1-201ENST00000405943 252 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 AL355497.1-201ENST00000406262 551 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 RNA5SP390-201ENST00000410191 113 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 AC096649.2-201ENST00000416186 393 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.51□□□□□ -1.53
PRIM1P49642 PRSS3P4-201ENST00000453323 162 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.51□□□□□ -1.53
PRIM1P49642 AC016925.1-201ENST00000458303 298 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.51□□□□□ -1.53
PRIM1P49642 HMGB1P22-201ENST00000505315 124 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.51□□□□□ -1.53
PRIM1P49642 SNRPGP15-201ENST00000600149 222 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 AL391903.3-201ENST00000612158 163 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PRIM1P49642 AC091905.2-201ENST00000623143 306 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 AC016588.2-201ENST00000632484 3021 ntBASIC5.51□□□□□ -1.53
PRIM1P49642 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.5□□□□□ -1.53
PRIM1P49642 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PRIM1P49642 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.5□□□□□ -1.53
PRIM1P49642 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRIM1P49642 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PRIM1P49642 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRIM1P49642 AC092435.4-201ENST00000623012 4159 ntBASIC5.5□□□□□ -1.53
PRIM1P49642 SNORA18.3-201ENST00000384122 132 ntBASIC5.5□□□□□ -1.53
PRIM1P49642 MIR616-201ENST00000385293 97 ntBASIC5.5□□□□□ -1.53
PRIM1P49642 Z74021.1-201ENST00000423610 407 ntBASIC5.5□□□□□ -1.53
PRIM1P49642 RPL23AP83-201ENST00000434984 473 ntBASIC5.5□□□□□ -1.53
PRIM1P49642 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.5□□□□□ -1.53
PRIM1P49642 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.5□□□□□ -1.53
PRIM1P49642 RNA5SP446-201ENST00000515955 82 ntBASIC5.5□□□□□ -1.53
PRIM1P49642 AL161756.2-201ENST00000604597 246 ntBASIC5.5□□□□□ -1.53
PRIM1P49642 AC012468.1-201ENST00000604888 430 ntBASIC5.5□□□□□ -1.53
PRIM1P49642 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PRIM1P49642 MIR6500-201ENST00000622700 86 ntBASIC5.5□□□□□ -1.53
PRIM1P49642 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRIM1P49642 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PRIM1P49642 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRIM1P49642 LINC01355-201ENST00000566551 5444 ntBASIC5.49□□□□□ -1.53
PRIM1P49642 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.49□□□□□ -1.53
PRIM1P49642 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRIM1P49642 RNU6-778P-201ENST00000363269 103 ntBASIC5.49□□□□□ -1.53
PRIM1P49642 RNU6-324P-201ENST00000363957 106 ntBASIC5.49□□□□□ -1.53
PRIM1P49642 U3.40-201ENST00000408706 208 ntBASIC5.49□□□□□ -1.53
PRIM1P49642 snoU13.6-201ENST00000458785 104 ntBASIC5.49□□□□□ -1.53
PRIM1P49642 RNA5SP246-201ENST00000458909 119 ntBASIC5.49□□□□□ -1.53
PRIM1P49642 AC091179.3-201ENST00000474761 144 ntBASIC5.49□□□□□ -1.53
PRIM1P49642 RPL30P5-201ENST00000494923 336 ntBASIC5.49□□□□□ -1.53
PRIM1P49642 RNA5SP170-201ENST00000517150 101 ntBASIC5.49□□□□□ -1.53
PRIM1P49642 RNU2-12P-201ENST00000517216 168 ntBASIC5.49□□□□□ -1.53
PRIM1P49642 NACAP3-201ENST00000552100 481 ntBASIC5.49□□□□□ -1.53
PRIM1P49642 U7.2-201ENST00000607576 63 ntBASIC5.49□□□□□ -1.53
PRIM1P49642 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.49□□□□□ -1.53
PRIM1P49642 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms