Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TBCAP3-201ENST00000512475 312 ntBASIC2.6□□□□□ -1.99
MTHFRP42898 RNA5SP401-201ENST00000515920 127 ntBASIC2.6□□□□□ -1.99
MTHFRP42898 RNU6-835P-201ENST00000516974 104 ntBASIC2.6□□□□□ -1.99
MTHFRP42898 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.6□□□□□ -1.99
MTHFRP42898 MTND4P7-201ENST00000523876 130 ntBASIC2.6□□□□□ -1.99
MTHFRP42898 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.6□□□□□ -1.99
MTHFRP42898 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.6□□□□□ -1.99
MTHFRP42898 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.6□□□□□ -1.99
MTHFRP42898 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.6□□□□□ -1.99
MTHFRP42898 MIR5571-201ENST00000577998 113 ntBASIC2.6□□□□□ -1.99
MTHFRP42898 AL670379.10-201ENST00000604330 253 ntBASIC2.6□□□□□ -1.99
MTHFRP42898 AL670379.9-201ENST00000605428 253 ntBASIC2.6□□□□□ -1.99
MTHFRP42898 AC007014.2-201ENST00000615581 479 ntBASIC2.6□□□□□ -1.99
MTHFRP42898 SCARNA4-202ENST00000625402 129 ntBASIC2.6□□□□□ -1.99
MTHFRP42898 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
MTHFRP42898 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
MTHFRP42898 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
MTHFRP42898 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
MTHFRP42898 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.6□□□□□ -1.99
MTHFRP42898 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
MTHFRP42898 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.59□□□□□ -1.99
MTHFRP42898 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
MTHFRP42898 RNU6-1090P-201ENST00000364065 94 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 Y_RNA.324-201ENST00000365165 102 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 RNU4-12P-201ENST00000365233 139 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 AL590002.1-201ENST00000406554 418 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 RNU4-26P-201ENST00000410270 107 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.59□□□□□ -1.99
MTHFRP42898 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.59□□□□□ -1.99
MTHFRP42898 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.59□□□□□ -1.99
MTHFRP42898 AL591806.2-201ENST00000433122 173 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.59□□□□□ -1.99
MTHFRP42898 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.59□□□□□ -1.99
MTHFRP42898 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.59□□□□□ -1.99
MTHFRP42898 MTAPP1-201ENST00000489154 819 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.59□□□□□ -1.99
MTHFRP42898 CCDC34P1-201ENST00000507441 517 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.59□□□□□ -1.99
MTHFRP42898 MYL12BP1-201ENST00000569826 507 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 AC105245.1-201ENST00000581934 244 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.59□□□□□ -1.99
MTHFRP42898 MIR3670-2-201ENST00000582974 65 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 MIR3670-1-201ENST00000584160 65 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 MIR3670-3-201ENST00000584855 65 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 AC002044.1-201ENST00000606707 158 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 MIR3670-4-201ENST00000612260 65 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 AC245884.12-201ENST00000615364 59 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 AC244517.12-201ENST00000623581 663 ntBASIC2.59□□□□□ -1.99
MTHFRP42898 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
MTHFRP42898 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.58□□□□□ -2
MTHFRP42898 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.58□□□□□ -2
MTHFRP42898 RNY4P14-201ENST00000363656 96 ntBASIC2.58□□□□□ -2
MTHFRP42898 RNU6-483P-201ENST00000384088 108 ntBASIC2.58□□□□□ -2
MTHFRP42898 MIR218-1-201ENST00000384999 110 ntBASIC2.58□□□□□ -2
MTHFRP42898 RAP1BP3-201ENST00000407180 549 ntBASIC2.58□□□□□ -2
MTHFRP42898 RPL30P4-201ENST00000429309 333 ntBASIC2.58□□□□□ -2
MTHFRP42898 MTND1P2-201ENST00000430604 821 ntBASIC2.58□□□□□ -2
MTHFRP42898 HMGB1P31-201ENST00000437242 427 ntBASIC2.58□□□□□ -2
MTHFRP42898 AL121601.2-201ENST00000438019 707 ntBASIC2.58□□□□□ -2
MTHFRP42898 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.58□□□□□ -2
MTHFRP42898 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.58□□□□□ -2
MTHFRP42898 MED28P2-201ENST00000475771 317 ntBASIC2.58□□□□□ -2
MTHFRP42898 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.58□□□□□ -2
MTHFRP42898 HMGB3P3-201ENST00000510526 400 ntBASIC2.58□□□□□ -2
MTHFRP42898 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.58□□□□□ -2
MTHFRP42898 SNORA25.11-201ENST00000515935 105 ntBASIC2.58□□□□□ -2
MTHFRP42898 RNU6-1281P-201ENST00000516223 105 ntBASIC2.58□□□□□ -2
MTHFRP42898 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.58□□□□□ -2
MTHFRP42898 AL133241.1-201ENST00000556832 487 ntBASIC2.58□□□□□ -2
MTHFRP42898 SNORA59B-202ENST00000578183 701 ntBASIC2.58□□□□□ -2
MTHFRP42898 MIR4424-201ENST00000585257 86 ntBASIC2.58□□□□□ -2
MTHFRP42898 RPS15AP11-201ENST00000594193 385 ntBASIC2.58□□□□□ -2
MTHFRP42898 AL356575.1-201ENST00000603008 283 ntBASIC2.58□□□□□ -2
MTHFRP42898 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.58□□□□□ -2
MTHFRP42898 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.57□□□□□ -2
MTHFRP42898 Y_RNA.9-201ENST00000362354 101 ntBASIC2.57□□□□□ -2
MTHFRP42898 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
MTHFRP42898 SNORD116-20-201ENST00000384529 92 ntBASIC2.57□□□□□ -2
MTHFRP42898 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.57□□□□□ -2
MTHFRP42898 MIR1289-2-201ENST00000408360 111 ntBASIC2.57□□□□□ -2
MTHFRP42898 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.57□□□□□ -2
MTHFRP42898 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.57□□□□□ -2
MTHFRP42898 AC018437.1-201ENST00000492214 406 ntBASIC2.57□□□□□ -2
MTHFRP42898 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.57□□□□□ -2
MTHFRP42898 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.57□□□□□ -2
MTHFRP42898 RNU6-1038P-201ENST00000516516 104 ntBASIC2.57□□□□□ -2
MTHFRP42898 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.57□□□□□ -2
MTHFRP42898 AC021269.2-201ENST00000532318 330 ntBASIC2.57□□□□□ -2
MTHFRP42898 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.57□□□□□ -2
MTHFRP42898 AL157687.1-201ENST00000554853 619 ntBASIC2.57□□□□□ -2
MTHFRP42898 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.57□□□□□ -2
MTHFRP42898 AC009127.3-201ENST00000570531 403 ntBASIC2.57□□□□□ -2
MTHFRP42898 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.57□□□□□ -2
MTHFRP42898 AC025754.2-201ENST00000606491 432 ntBASIC2.57□□□□□ -2
MTHFRP42898 U2.17-201ENST00000611454 95 ntBASIC2.57□□□□□ -2
MTHFRP42898 AC024581.2-201ENST00000619986 252 ntBASIC2.57□□□□□ -2
MTHFRP42898 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
MTHFRP42898 AC138627.2-201ENST00000624202 601 ntBASIC2.57□□□□□ -2
MTHFRP42898 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.57□□□□□ -2
MTHFRP42898 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms