Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MIR95-201ENST00000385072 81 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 MIR524-201ENST00000385242 87 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 RPL17P50-201ENST00000396131 546 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 RNU6-293P-201ENST00000411259 106 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 POLHP1-201ENST00000411806 470 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.6□□□□□ -1.99
HOXD13P35453 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXD13P35453 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXD13P35453 CR769767.1-201ENST00000436337 346 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 AC009238.1-201ENST00000442165 424 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXD13P35453 AC009237.6-201ENST00000446969 424 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 AC013470.1-201ENST00000453438 462 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 RNU7-138P-201ENST00000459479 64 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 AL121594.1-201ENST00000475906 575 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 CCDC34P1-201ENST00000507441 517 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXD13P35453 SNORA48.11-201ENST00000517015 89 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 CBX3P7-201ENST00000532876 502 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXD13P35453 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXD13P35453 VN1R80P-201ENST00000597126 338 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXD13P35453 AC025165.5-201ENST00000602802 578 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
HOXD13P35453 AC103705.1-201ENST00000619013 241 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 AC090517.3-201ENST00000625170 141 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HOXD13P35453 RNU6-38P-201ENST00000384085 107 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 MIR181A1-201ENST00000385026 110 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXD13P35453 AL590002.1-201ENST00000406554 418 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 RNU6-648P-201ENST00000410190 107 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXD13P35453 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXD13P35453 RNU6-333P-201ENST00000459117 107 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 AP000852.1-201ENST00000472460 573 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 RPL21P99-201ENST00000480369 423 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 RPL30P1-201ENST00000488676 339 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 Y_RNA.654-201ENST00000497848 106 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.59□□□□□ -1.99
HOXD13P35453 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXD13P35453 AC234781.5-201ENST00000508429 271 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 IMMP1LP2-201ENST00000552954 492 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 ZNF519P2-201ENST00000557032 169 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 AC093249.1-201ENST00000567049 203 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 AC092747.3-201ENST00000603769 301 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 AL356157.2-201ENST00000605122 111 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 AL137847.3-201ENST00000611521 109 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 DISC2.1-201ENST00000612827 205 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 MIR6852-201ENST00000621699 66 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 CTSLP2-204ENST00000629029 392 ntBASIC2.59□□□□□ -1.99
HOXD13P35453 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HOXD13P35453 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.59□□□□□ -2
HOXD13P35453 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.59□□□□□ -2
HOXD13P35453 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HOXD13P35453 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HOXD13P35453 RNU6-336P-201ENST00000364891 107 ntBASIC2.58□□□□□ -2
HOXD13P35453 Y_RNA.372-201ENST00000365599 102 ntBASIC2.58□□□□□ -2
HOXD13P35453 MIR29B2-201ENST00000385055 81 ntBASIC2.58□□□□□ -2
HOXD13P35453 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.58□□□□□ -2
HOXD13P35453 AL117339.3-201ENST00000418733 162 ntBASIC2.58□□□□□ -2
HOXD13P35453 AL590556.1-201ENST00000423231 483 ntBASIC2.58□□□□□ -2
HOXD13P35453 RPS15AP10-201ENST00000432472 382 ntBASIC2.58□□□□□ -2
HOXD13P35453 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.58□□□□□ -2
HOXD13P35453 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.58□□□□□ -2
HOXD13P35453 AL513328.1-201ENST00000446460 224 ntBASIC2.58□□□□□ -2
HOXD13P35453 RN7SL636P-201ENST00000497504 294 ntBASIC2.58□□□□□ -2
HOXD13P35453 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.58□□□□□ -2
HOXD13P35453 AC087854.1-201ENST00000519706 414 ntBASIC2.58□□□□□ -2
HOXD13P35453 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.58□□□□□ -2
HOXD13P35453 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.58□□□□□ -2
HOXD13P35453 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.58□□□□□ -2
HOXD13P35453 AL138976.2-201ENST00000563989 694 ntBASIC2.58□□□□□ -2
HOXD13P35453 AC107304.1-201ENST00000604229 296 ntBASIC2.58□□□□□ -2
HOXD13P35453 AL159153.1-201ENST00000619688 317 ntBASIC2.58□□□□□ -2
HOXD13P35453 AL160394.1-201ENST00000624765 724 ntBASIC2.58□□□□□ -2
HOXD13P35453 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.58□□□□□ -2
HOXD13P35453 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.57□□□□□ -2
HOXD13P35453 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
HOXD13P35453 RNU6-827P-201ENST00000365553 106 ntBASIC2.57□□□□□ -2
HOXD13P35453 RPS29P13-201ENST00000402041 169 ntBASIC2.57□□□□□ -2
HOXD13P35453 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.57□□□□□ -2
HOXD13P35453 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.57□□□□□ -2
HOXD13P35453 MTND3P16-201ENST00000452205 344 ntBASIC2.57□□□□□ -2
HOXD13P35453 RPL38P4-201ENST00000502376 214 ntBASIC2.57□□□□□ -2
HOXD13P35453 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.57□□□□□ -2
HOXD13P35453 RNU6-720P-201ENST00000516363 108 ntBASIC2.57□□□□□ -2
HOXD13P35453 AC118273.2-201ENST00000532092 465 ntBASIC2.57□□□□□ -2
HOXD13P35453 AC021269.2-201ENST00000532318 330 ntBASIC2.57□□□□□ -2
HOXD13P35453 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.57□□□□□ -2
HOXD13P35453 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.57□□□□□ -2
HOXD13P35453 AC078814.3-201ENST00000553036 491 ntBASIC2.57□□□□□ -2
HOXD13P35453 AL157687.1-201ENST00000554853 619 ntBASIC2.57□□□□□ -2
HOXD13P35453 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.57□□□□□ -2
HOXD13P35453 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.57□□□□□ -2
HOXD13P35453 YWHAEP7-203ENST00000622054 312 ntBASIC2.57□□□□□ -2
HOXD13P35453 Z82209.1-201ENST00000422141 2135 ntBASIC2.57□□□□□ -2
HOXD13P35453 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms