Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.64□□□□□ -1.83
ATF4P18848 AC021146.4-201ENST00000309229 279 ntBASIC3.64□□□□□ -1.83
ATF4P18848 Y_RNA.64-201ENST00000362845 102 ntBASIC3.64□□□□□ -1.83
ATF4P18848 RNU6-793P-201ENST00000384233 104 ntBASIC3.64□□□□□ -1.83
ATF4P18848 SNORA46.1-201ENST00000391069 153 ntBASIC3.64□□□□□ -1.83
ATF4P18848 HMGN2P8-201ENST00000391458 268 ntBASIC3.64□□□□□ -1.83
ATF4P18848 AC114755.2-201ENST00000413520 361 ntBASIC3.64□□□□□ -1.83
ATF4P18848 TMSB10P2-201ENST00000416049 131 ntBASIC3.64□□□□□ -1.83
ATF4P18848 AC010095.1-201ENST00000443543 144 ntBASIC3.64□□□□□ -1.83
ATF4P18848 IGLV2-34-201ENST00000490007 283 ntBASIC3.64□□□□□ -1.83
ATF4P18848 RNU1-6P-201ENST00000516290 144 ntBASIC3.64□□□□□ -1.83
ATF4P18848 SCARNA3-201ENST00000517097 143 ntBASIC3.64□□□□□ -1.83
ATF4P18848 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.64□□□□□ -1.83
ATF4P18848 AP003733.2-201ENST00000529409 171 ntBASIC3.64□□□□□ -1.83
ATF4P18848 AC023824.2-201ENST00000566185 400 ntBASIC3.64□□□□□ -1.83
ATF4P18848 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.64□□□□□ -1.83
ATF4P18848 MIR3671-201ENST00000580455 88 ntBASIC3.64□□□□□ -1.83
ATF4P18848 AL391358.1-201ENST00000605342 190 ntBASIC3.64□□□□□ -1.83
ATF4P18848 MIR6748-201ENST00000610433 71 ntBASIC3.64□□□□□ -1.83
ATF4P18848 MIR6780A-201ENST00000615089 68 ntBASIC3.64□□□□□ -1.83
ATF4P18848 AC011476.5-201ENST00000615594 130 ntBASIC3.64□□□□□ -1.83
ATF4P18848 MIR376A1-201ENST00000616574 68 ntBASIC3.64□□□□□ -1.83
ATF4P18848 AL022401.1-201ENST00000619498 108 ntBASIC3.64□□□□□ -1.83
ATF4P18848 AC087385.3-201ENST00000620477 187 ntBASIC3.64□□□□□ -1.83
ATF4P18848 AC018692.3-201ENST00000623929 123 ntBASIC3.64□□□□□ -1.83
ATF4P18848 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATF4P18848 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ATF4P18848 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
ATF4P18848 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
ATF4P18848 LINC02555-201ENST00000563933 1951 ntBASIC3.63□□□□□ -1.83
ATF4P18848 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.63□□□□□ -1.83
ATF4P18848 MAPK10-362ENST00000641864 4484 ntBASIC3.63□□□□□ -1.83
ATF4P18848 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
ATF4P18848 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATF4P18848 RNU1-62P-201ENST00000362599 164 ntBASIC3.63□□□□□ -1.83
ATF4P18848 Y_RNA.143-201ENST00000363520 106 ntBASIC3.63□□□□□ -1.83
ATF4P18848 Y_RNA.222-201ENST00000364264 102 ntBASIC3.63□□□□□ -1.83
ATF4P18848 SNORA68.1-201ENST00000364537 132 ntBASIC3.63□□□□□ -1.83
ATF4P18848 SNORD21-201ENST00000383953 95 ntBASIC3.63□□□□□ -1.83
ATF4P18848 SNORA18.3-201ENST00000384122 132 ntBASIC3.63□□□□□ -1.83
ATF4P18848 Y_RNA.461-201ENST00000384263 103 ntBASIC3.63□□□□□ -1.83
ATF4P18848 MIR3065-201ENST00000390137 79 ntBASIC3.63□□□□□ -1.83
ATF4P18848 AL079342.1-201ENST00000401460 267 ntBASIC3.63□□□□□ -1.83
ATF4P18848 RPS12P18-201ENST00000442381 270 ntBASIC3.63□□□□□ -1.83
ATF4P18848 LINC01399-202ENST00000458450 244 ntBASIC3.63□□□□□ -1.83
ATF4P18848 AC091179.1-201ENST00000461606 579 ntBASIC3.63□□□□□ -1.83
ATF4P18848 RN7SL330P-201ENST00000469709 307 ntBASIC3.63□□□□□ -1.83
ATF4P18848 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.63□□□□□ -1.83
ATF4P18848 AC022655.2-201ENST00000577280 318 ntBASIC3.63□□□□□ -1.83
ATF4P18848 AC078899.3-201ENST00000599065 212 ntBASIC3.63□□□□□ -1.83
ATF4P18848 AC005562.2-201ENST00000618264 111 ntBASIC3.63□□□□□ -1.83
ATF4P18848 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.63□□□□□ -1.83
ATF4P18848 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATF4P18848 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATF4P18848 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
ATF4P18848 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF4P18848 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.63□□□□□ -1.83
ATF4P18848 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATF4P18848 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATF4P18848 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATF4P18848 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATF4P18848 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.62□□□□□ -1.83
ATF4P18848 SNORA60-201ENST00000362396 134 ntBASIC3.62□□□□□ -1.83
ATF4P18848 Y_RNA.288-201ENST00000364854 92 ntBASIC3.62□□□□□ -1.83
ATF4P18848 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ATF4P18848 U6atac.2-201ENST00000408644 118 ntBASIC3.62□□□□□ -1.83
ATF4P18848 RPL23AP25-201ENST00000430973 463 ntBASIC3.62□□□□□ -1.83
ATF4P18848 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.62□□□□□ -1.83
ATF4P18848 RN7SL585P-201ENST00000470538 280 ntBASIC3.62□□□□□ -1.83
ATF4P18848 RN7SL601P-201ENST00000471221 293 ntBASIC3.62□□□□□ -1.83
ATF4P18848 AC093249.4-201ENST00000564755 259 ntBASIC3.62□□□□□ -1.83
ATF4P18848 AC091042.1-201ENST00000579213 173 ntBASIC3.62□□□□□ -1.83
ATF4P18848 MIR4270-201ENST00000581799 70 ntBASIC3.62□□□□□ -1.83
ATF4P18848 MIR3199-1-201ENST00000582434 88 ntBASIC3.62□□□□□ -1.83
ATF4P18848 RPL17P51-201ENST00000605218 238 ntBASIC3.62□□□□□ -1.83
ATF4P18848 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.62□□□□□ -1.83
ATF4P18848 TCL6_2.1-201ENST00000615162 119 ntBASIC3.62□□□□□ -1.83
ATF4P18848 AC092628.2-201ENST00000622492 339 ntBASIC3.62□□□□□ -1.83
ATF4P18848 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.62□□□□□ -1.83
ATF4P18848 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ATF4P18848 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ATF4P18848 AL079305.1-201ENST00000623159 3008 ntBASIC3.62□□□□□ -1.83
ATF4P18848 MTND5P35-201ENST00000557537 1720 ntBASIC3.61□□□□□ -1.83
ATF4P18848 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATF4P18848 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.61□□□□□ -1.83
ATF4P18848 RNU6-806P-201ENST00000365147 105 ntBASIC3.61□□□□□ -1.83
ATF4P18848 MIR218-1-201ENST00000384999 110 ntBASIC3.61□□□□□ -1.83
ATF4P18848 MIR549A-201ENST00000385268 96 ntBASIC3.61□□□□□ -1.83
ATF4P18848 RNU1-82P-201ENST00000390851 165 ntBASIC3.61□□□□□ -1.83
ATF4P18848 Y_RNA.625-201ENST00000411256 107 ntBASIC3.61□□□□□ -1.83
ATF4P18848 AC096920.1-201ENST00000423991 241 ntBASIC3.61□□□□□ -1.83
ATF4P18848 AC027124.2-201ENST00000428249 105 ntBASIC3.61□□□□□ -1.83
ATF4P18848 COX6B1P7-201ENST00000430845 235 ntBASIC3.61□□□□□ -1.83
ATF4P18848 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.61□□□□□ -1.83
ATF4P18848 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF4P18848 AC006517.1-201ENST00000480485 328 ntBASIC3.61□□□□□ -1.83
ATF4P18848 AC025465.3-201ENST00000510570 311 ntBASIC3.61□□□□□ -1.83
ATF4P18848 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF4P18848 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF4P18848 MIR4330-201ENST00000579077 105 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 392 ms