Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.43□□□□□ -2.34
ABCA1O95477 ZNF92P2-201ENST00000600543 1059 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 BNIP3P30-201ENST00000601184 574 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 AL358072.1-201ENST00000604156 575 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 AC100821.1-201ENST00000523153 2479 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 RNU6-1019P-201ENST00000364424 107 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 RNU6-1222P-201ENST00000384615 107 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 MIR100-201ENST00000385259 80 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.43□□□□□ -2.34
ABCA1O95477 AC087477.1-201ENST00000465747 340 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 RNU6-322P-201ENST00000516010 103 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.43□□□□□ -2.34
ABCA1O95477 AC008945.2-201ENST00000606056 604 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 AC034229.4-201ENST00000607861 441 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 AC123767.1-202ENST00000620407 817 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 AL442644.1-201ENST00000454390 3105 ntBASIC0.43□□□□□ -2.34
ABCA1O95477 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.42□□□□□ -2.34
ABCA1O95477 OR5T3-201ENST00000303059 1023 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
ABCA1O95477 SNORD114-6-201ENST00000364393 72 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 DHFRP6-201ENST00000401776 268 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 AC019070.1-201ENST00000415008 1024 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 AC010153.1-201ENST00000432862 727 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 AC027119.1-201ENST00000440877 241 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.42□□□□□ -2.34
ABCA1O95477 AC092001.1-201ENST00000453012 261 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 HMGN2P9-201ENST00000476875 229 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 TMEM251P1-201ENST00000503717 318 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 MTCYBP40-201ENST00000509390 1135 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 AC009646.1-201ENST00000510455 318 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 MTND5P13-201ENST00000513046 1079 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.42□□□□□ -2.34
ABCA1O95477 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.42□□□□□ -2.34
ABCA1O95477 AC016911.1-201ENST00000613297 452 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 AC087588.2-201ENST00000617667 426 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 AC008993.2-201ENST00000631744 806 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 AC132825.7-201ENST00000638744 335 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 AC107982.1-201ENST00000507171 1300 ntBASIC0.42□□□□□ -2.34
ABCA1O95477 SNORA72.2-201ENST00000365028 127 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 RNU6-1176P-201ENST00000390955 107 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 RNA5SP63-201ENST00000391225 112 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 AL359634.1-202ENST00000404721 284 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 MTND2P9-201ENST00000422293 931 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 GTF2IP3-201ENST00000433887 494 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 AL133373.1-201ENST00000497098 94 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 MTND2P33-201ENST00000506452 1031 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.41□□□□□ -2.34
ABCA1O95477 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.41□□□□□ -2.34
ABCA1O95477 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.41□□□□□ -2.34
ABCA1O95477 SNRPGP1-201ENST00000553864 222 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 SNORA77B-201ENST00000578179 125 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 AC023932.2-201ENST00000603176 175 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 MIR26B-201ENST00000362251 77 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 SNORA2A-201ENST00000383885 135 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 RNU6-968P-201ENST00000384076 107 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 SNORD65.1-201ENST00000390889 71 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 RNU6-1245P-201ENST00000411130 106 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.41□□□□□ -2.34
ABCA1O95477 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.41□□□□□ -2.34
ABCA1O95477 AL135790.2-201ENST00000437701 267 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.41□□□□□ -2.34
ABCA1O95477 RNU7-136P-201ENST00000458819 69 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.41□□□□□ -2.34
ABCA1O95477 AC005741.1-201ENST00000511094 432 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.41□□□□□ -2.34
ABCA1O95477 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.41□□□□□ -2.34
ABCA1O95477 AC009902.1-201ENST00000519351 183 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 MTCO2P15-201ENST00000532655 656 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 AC004492.1-201ENST00000607036 742 ntBASIC0.41□□□□□ -2.34
ABCA1O95477 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
ABCA1O95477 AL589743.1-201ENST00000551932 2712 ntBASIC0.4□□□□□ -2.34
ABCA1O95477 RNU6-1164P-201ENST00000364428 107 ntBASIC0.4□□□□□ -2.34
ABCA1O95477 RNU6-438P-201ENST00000365561 103 ntBASIC0.4□□□□□ -2.34
ABCA1O95477 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.4□□□□□ -2.34
ABCA1O95477 MIR194-1-201ENST00000384892 85 ntBASIC0.4□□□□□ -2.34
ABCA1O95477 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.4□□□□□ -2.34
ABCA1O95477 Z99497.1-201ENST00000421282 135 ntBASIC0.4□□□□□ -2.34
ABCA1O95477 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.4□□□□□ -2.34
ABCA1O95477 AC099677.2-201ENST00000436385 175 ntBASIC0.4□□□□□ -2.34
ABCA1O95477 RPL26P26-201ENST00000480251 434 ntBASIC0.4□□□□□ -2.34
ABCA1O95477 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.4□□□□□ -2.34
ABCA1O95477 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.4□□□□□ -2.34
ABCA1O95477 AL161798.1-201ENST00000604630 131 ntBASIC0.4□□□□□ -2.34
ABCA1O95477 AP000860.1-201ENST00000605250 559 ntBASIC0.4□□□□□ -2.34
ABCA1O95477 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.4□□□□□ -2.34
ABCA1O95477 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.4□□□□□ -2.34
ABCA1O95477 RNU6-188P-201ENST00000364207 107 ntBASIC0.4□□□□□ -2.35
ABCA1O95477 SNORA4.1-201ENST00000364263 144 ntBASIC0.4□□□□□ -2.35
ABCA1O95477 Y_RNA.332-201ENST00000365271 113 ntBASIC0.4□□□□□ -2.35
ABCA1O95477 MIR186-201ENST00000384988 86 ntBASIC0.4□□□□□ -2.35
ABCA1O95477 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.4□□□□□ -2.35
ABCA1O95477 PIGFP2-201ENST00000421400 651 ntBASIC0.4□□□□□ -2.35
ABCA1O95477 HSPE1P13-201ENST00000451143 297 ntBASIC0.4□□□□□ -2.35
ABCA1O95477 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.4□□□□□ -2.35
ABCA1O95477 SNORA62.5-201ENST00000516634 120 ntBASIC0.4□□□□□ -2.35
ABCA1O95477 AL442163.3-201ENST00000554110 156 ntBASIC0.4□□□□□ -2.35
ABCA1O95477 HIGD1AP17-201ENST00000554576 276 ntBASIC0.4□□□□□ -2.35
ABCA1O95477 HMGB1P33-201ENST00000563485 527 ntBASIC0.4□□□□□ -2.35
ABCA1O95477 AL022345.2-201ENST00000606307 135 ntBASIC0.4□□□□□ -2.35
ABCA1O95477 uc_338.17-201ENST00000619633 179 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms