Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.76□□□□□ -1.97
RTN3O95197 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.76□□□□□ -1.97
RTN3O95197 Y_RNA.38-201ENST00000362617 102 ntBASIC2.76□□□□□ -1.97
RTN3O95197 RNU6-451P-201ENST00000362921 107 ntBASIC2.76□□□□□ -1.97
RTN3O95197 RNU1-72P-201ENST00000362976 153 ntBASIC2.76□□□□□ -1.97
RTN3O95197 RNU4-12P-201ENST00000365233 139 ntBASIC2.76□□□□□ -1.97
RTN3O95197 Y_RNA.450-201ENST00000384198 113 ntBASIC2.76□□□□□ -1.97
RTN3O95197 RNU6-1072P-201ENST00000384703 107 ntBASIC2.76□□□□□ -1.97
RTN3O95197 RNU6-443P-201ENST00000384780 107 ntBASIC2.76□□□□□ -1.97
RTN3O95197 MIR186-201ENST00000384988 86 ntBASIC2.76□□□□□ -1.97
RTN3O95197 RNA5SP181-201ENST00000410246 98 ntBASIC2.76□□□□□ -1.97
RTN3O95197 MTCO1P21-201ENST00000416634 589 ntBASIC2.76□□□□□ -1.97
RTN3O95197 AC003685.2-201ENST00000422795 395 ntBASIC2.76□□□□□ -1.97
RTN3O95197 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RTN3O95197 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.76□□□□□ -1.97
RTN3O95197 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RTN3O95197 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.76□□□□□ -1.97
RTN3O95197 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.76□□□□□ -1.97
RTN3O95197 RNU6-1069P-201ENST00000516612 133 ntBASIC2.76□□□□□ -1.97
RTN3O95197 RNA5SP82-201ENST00000516707 92 ntBASIC2.76□□□□□ -1.97
RTN3O95197 MTND1P5-201ENST00000517906 940 ntBASIC2.76□□□□□ -1.97
RTN3O95197 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.76□□□□□ -1.97
RTN3O95197 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.76□□□□□ -1.97
RTN3O95197 AC078814.3-201ENST00000553036 491 ntBASIC2.76□□□□□ -1.97
RTN3O95197 BNIP3P16-201ENST00000589779 534 ntBASIC2.76□□□□□ -1.97
RTN3O95197 VN1R107P-201ENST00000601784 209 ntBASIC2.76□□□□□ -1.97
RTN3O95197 RNU6-89P-201ENST00000606519 100 ntBASIC2.76□□□□□ -1.97
RTN3O95197 MIR5739-201ENST00000619803 80 ntBASIC2.76□□□□□ -1.97
RTN3O95197 AC097372.5-201ENST00000623665 376 ntBASIC2.76□□□□□ -1.97
RTN3O95197 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RTN3O95197 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.75□□□□□ -1.97
RTN3O95197 AC121333.1-201ENST00000567488 2709 ntBASIC2.75□□□□□ -1.97
RTN3O95197 RNU6-336P-201ENST00000364891 107 ntBASIC2.75□□□□□ -1.97
RTN3O95197 Y_RNA.573-201ENST00000384763 105 ntBASIC2.75□□□□□ -1.97
RTN3O95197 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RTN3O95197 RNU6-192P-201ENST00000391253 100 ntBASIC2.75□□□□□ -1.97
RTN3O95197 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.75□□□□□ -1.97
RTN3O95197 AF274854.1-201ENST00000413236 615 ntBASIC2.75□□□□□ -1.97
RTN3O95197 SNRPEP10-201ENST00000420249 274 ntBASIC2.75□□□□□ -1.97
RTN3O95197 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.75□□□□□ -1.97
RTN3O95197 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.75□□□□□ -1.97
RTN3O95197 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.75□□□□□ -1.97
RTN3O95197 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.75□□□□□ -1.97
RTN3O95197 snoU13.14-201ENST00000459372 104 ntBASIC2.75□□□□□ -1.97
RTN3O95197 RPL30P12-201ENST00000474666 353 ntBASIC2.75□□□□□ -1.97
RTN3O95197 SNORA19.2-201ENST00000516013 114 ntBASIC2.75□□□□□ -1.97
RTN3O95197 RNU2-53P-201ENST00000516257 147 ntBASIC2.75□□□□□ -1.97
RTN3O95197 AC087854.1-201ENST00000519706 414 ntBASIC2.75□□□□□ -1.97
RTN3O95197 MTND1P35-201ENST00000526739 508 ntBASIC2.75□□□□□ -1.97
RTN3O95197 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.75□□□□□ -1.97
RTN3O95197 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.75□□□□□ -1.97
RTN3O95197 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.75□□□□□ -1.97
RTN3O95197 HMGB1P24-202ENST00000615653 685 ntBASIC2.75□□□□□ -1.97
RTN3O95197 AC073869.6-201ENST00000640656 341 ntBASIC2.75□□□□□ -1.97
RTN3O95197 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
RTN3O95197 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RTN3O95197 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RTN3O95197 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.74□□□□□ -1.97
RTN3O95197 SNORD62.1-201ENST00000362541 86 ntBASIC2.74□□□□□ -1.97
RTN3O95197 RNU6-212P-201ENST00000362642 104 ntBASIC2.74□□□□□ -1.97
RTN3O95197 RNU6-428P-201ENST00000362942 107 ntBASIC2.74□□□□□ -1.97
RTN3O95197 RNU6-529P-201ENST00000363383 104 ntBASIC2.74□□□□□ -1.97
RTN3O95197 RNA5SP68-201ENST00000363885 119 ntBASIC2.74□□□□□ -1.97
RTN3O95197 RNA5SP125-201ENST00000364843 120 ntBASIC2.74□□□□□ -1.97
RTN3O95197 RNU6-827P-201ENST00000365553 106 ntBASIC2.74□□□□□ -1.97
RTN3O95197 RNU6-1106P-201ENST00000390845 107 ntBASIC2.74□□□□□ -1.97
RTN3O95197 EIF4E2P1-201ENST00000393781 255 ntBASIC2.74□□□□□ -1.97
RTN3O95197 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTN3O95197 RPS29P13-201ENST00000402041 169 ntBASIC2.74□□□□□ -1.97
RTN3O95197 RNU2-63P-201ENST00000410792 194 ntBASIC2.74□□□□□ -1.97
RTN3O95197 RNU6-293P-201ENST00000411259 106 ntBASIC2.74□□□□□ -1.97
RTN3O95197 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.74□□□□□ -1.97
RTN3O95197 AC008267.5-201ENST00000424928 265 ntBASIC2.74□□□□□ -1.97
RTN3O95197 USP9YP18-201ENST00000425912 695 ntBASIC2.74□□□□□ -1.97
RTN3O95197 C8orf59P1-201ENST00000429930 303 ntBASIC2.74□□□□□ -1.97
RTN3O95197 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RTN3O95197 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.74□□□□□ -1.97
RTN3O95197 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.74□□□□□ -1.97
RTN3O95197 AK3P2-201ENST00000507976 429 ntBASIC2.74□□□□□ -1.97
RTN3O95197 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.74□□□□□ -1.97
RTN3O95197 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.74□□□□□ -1.97
RTN3O95197 AC060766.3-201ENST00000591442 263 ntBASIC2.74□□□□□ -1.97
RTN3O95197 MIR6817-201ENST00000615588 66 ntBASIC2.74□□□□□ -1.97
RTN3O95197 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.74□□□□□ -1.97
RTN3O95197 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.74□□□□□ -1.97
RTN3O95197 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RTN3O95197 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RTN3O95197 RNU6-655P-201ENST00000362858 107 ntBASIC2.73□□□□□ -1.97
RTN3O95197 SNORA38-201ENST00000363946 132 ntBASIC2.73□□□□□ -1.97
RTN3O95197 RNU6-522P-201ENST00000364497 107 ntBASIC2.73□□□□□ -1.97
RTN3O95197 RNA5SP240-201ENST00000365355 128 ntBASIC2.73□□□□□ -1.97
RTN3O95197 SNORA80E-201ENST00000384744 137 ntBASIC2.73□□□□□ -1.97
RTN3O95197 MIR544A-201ENST00000384855 91 ntBASIC2.73□□□□□ -1.97
RTN3O95197 RNU4-26P-201ENST00000410270 107 ntBASIC2.73□□□□□ -1.97
RTN3O95197 CYCSP48-201ENST00000417124 323 ntBASIC2.73□□□□□ -1.97
RTN3O95197 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.73□□□□□ -1.97
RTN3O95197 SRIP2-201ENST00000428470 166 ntBASIC2.73□□□□□ -1.97
RTN3O95197 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.73□□□□□ -1.97
RTN3O95197 AC011816.1-201ENST00000441346 546 ntBASIC2.73□□□□□ -1.97
RTN3O95197 RPL39P29-201ENST00000447779 157 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms