Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.26□□□□□ -2.05
E2F3O00716 Y_RNA.9-201ENST00000362354 101 ntBASIC2.26□□□□□ -2.05
E2F3O00716 RNU1-91P-201ENST00000364746 163 ntBASIC2.26□□□□□ -2.05
E2F3O00716 RNU6-166P-201ENST00000384371 107 ntBASIC2.26□□□□□ -2.05
E2F3O00716 RNU6-45P-201ENST00000384471 107 ntBASIC2.26□□□□□ -2.05
E2F3O00716 RNU6-393P-201ENST00000384475 107 ntBASIC2.26□□□□□ -2.05
E2F3O00716 SNORD70.1-201ENST00000391007 85 ntBASIC2.26□□□□□ -2.05
E2F3O00716 Y_RNA.619-201ENST00000410951 90 ntBASIC2.26□□□□□ -2.05
E2F3O00716 FCF1P9-201ENST00000412546 282 ntBASIC2.26□□□□□ -2.05
E2F3O00716 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.26□□□□□ -2.05
E2F3O00716 MTND1P23-201ENST00000416931 372 ntBASIC2.26□□□□□ -2.05
E2F3O00716 AL353621.1-201ENST00000418219 243 ntBASIC2.26□□□□□ -2.05
E2F3O00716 USP9YP27-201ENST00000418455 438 ntBASIC2.26□□□□□ -2.05
E2F3O00716 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.26□□□□□ -2.05
E2F3O00716 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.26□□□□□ -2.05
E2F3O00716 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.26□□□□□ -2.05
E2F3O00716 C8orf59P1-201ENST00000429930 303 ntBASIC2.26□□□□□ -2.05
E2F3O00716 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.26□□□□□ -2.05
E2F3O00716 RPS15AP28-201ENST00000435088 386 ntBASIC2.26□□□□□ -2.05
E2F3O00716 HIGD1AP2-201ENST00000446367 280 ntBASIC2.26□□□□□ -2.05
E2F3O00716 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.26□□□□□ -2.05
E2F3O00716 HMGB1P30-201ENST00000492455 606 ntBASIC2.26□□□□□ -2.05
E2F3O00716 CKS1BP2-201ENST00000497342 240 ntBASIC2.26□□□□□ -2.05
E2F3O00716 RN7SL636P-201ENST00000497504 294 ntBASIC2.26□□□□□ -2.05
E2F3O00716 FAM92A1P2-202ENST00000504766 877 ntBASIC2.26□□□□□ -2.05
E2F3O00716 AC234781.5-201ENST00000508429 271 ntBASIC2.26□□□□□ -2.05
E2F3O00716 LRRC34P2-201ENST00000514850 553 ntBASIC2.26□□□□□ -2.05
E2F3O00716 MIR514B-201ENST00000516774 80 ntBASIC2.26□□□□□ -2.05
E2F3O00716 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.26□□□□□ -2.05
E2F3O00716 OR5AQ1P-201ENST00000527596 927 ntBASIC2.26□□□□□ -2.05
E2F3O00716 AC021269.2-201ENST00000532318 330 ntBASIC2.26□□□□□ -2.05
E2F3O00716 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.26□□□□□ -2.05
E2F3O00716 AC136619.2-201ENST00000563361 631 ntBASIC2.26□□□□□ -2.05
E2F3O00716 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.26□□□□□ -2.05
E2F3O00716 TPRKBP2-201ENST00000565969 475 ntBASIC2.26□□□□□ -2.05
E2F3O00716 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.26□□□□□ -2.05
E2F3O00716 AC046143.2-201ENST00000609789 160 ntBASIC2.26□□□□□ -2.05
E2F3O00716 U4.5-201ENST00000617137 123 ntBASIC2.26□□□□□ -2.05
E2F3O00716 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.26□□□□□ -2.05
E2F3O00716 AL031601.2-202ENST00000622650 282 ntBASIC2.26□□□□□ -2.05
E2F3O00716 AC138627.2-201ENST00000624202 601 ntBASIC2.26□□□□□ -2.05
E2F3O00716 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
E2F3O00716 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
E2F3O00716 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
E2F3O00716 SNORD3E-201ENST00000362899 217 ntBASIC2.25□□□□□ -2.05
E2F3O00716 SNORA75B-201ENST00000384053 137 ntBASIC2.25□□□□□ -2.05
E2F3O00716 U3.40-201ENST00000408706 208 ntBASIC2.25□□□□□ -2.05
E2F3O00716 Y_RNA.623-201ENST00000411128 95 ntBASIC2.25□□□□□ -2.05
E2F3O00716 RNA5SP270-201ENST00000411361 118 ntBASIC2.25□□□□□ -2.05
E2F3O00716 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.25□□□□□ -2.05
E2F3O00716 AC018634.1-201ENST00000437554 401 ntBASIC2.25□□□□□ -2.05
E2F3O00716 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.25□□□□□ -2.05
E2F3O00716 AL360271.2-201ENST00000447710 161 ntBASIC2.25□□□□□ -2.05
E2F3O00716 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.25□□□□□ -2.05
E2F3O00716 AC140059.1-201ENST00000489238 361 ntBASIC2.25□□□□□ -2.05
E2F3O00716 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
E2F3O00716 MTND3P25-201ENST00000509243 135 ntBASIC2.25□□□□□ -2.05
E2F3O00716 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.25□□□□□ -2.05
E2F3O00716 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.25□□□□□ -2.05
E2F3O00716 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.25□□□□□ -2.05
E2F3O00716 MTND4P7-201ENST00000523876 130 ntBASIC2.25□□□□□ -2.05
E2F3O00716 AL137161.1-201ENST00000532231 390 ntBASIC2.25□□□□□ -2.05
E2F3O00716 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.25□□□□□ -2.05
E2F3O00716 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.25□□□□□ -2.05
E2F3O00716 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.25□□□□□ -2.05
E2F3O00716 AK6P1-201ENST00000540219 478 ntBASIC2.25□□□□□ -2.05
E2F3O00716 AC079598.5-201ENST00000547460 117 ntBASIC2.25□□□□□ -2.05
E2F3O00716 AC092325.1-201ENST00000566449 554 ntBASIC2.25□□□□□ -2.05
E2F3O00716 AC105137.2-201ENST00000569073 466 ntBASIC2.25□□□□□ -2.05
E2F3O00716 MIR5007-201ENST00000583098 95 ntBASIC2.25□□□□□ -2.05
E2F3O00716 AL162413.1-201ENST00000603198 110 ntBASIC2.25□□□□□ -2.05
E2F3O00716 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.25□□□□□ -2.05
E2F3O00716 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.25□□□□□ -2.05
E2F3O00716 MIR5739-201ENST00000619803 80 ntBASIC2.25□□□□□ -2.05
E2F3O00716 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.25□□□□□ -2.05
E2F3O00716 MIR6766-201ENST00000622641 72 ntBASIC2.25□□□□□ -2.05
E2F3O00716 AL160394.1-201ENST00000624765 724 ntBASIC2.25□□□□□ -2.05
E2F3O00716 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.25□□□□□ -2.05
E2F3O00716 AL354685.2-201ENST00000448218 1447 ntBASIC2.25□□□□□ -2.05
E2F3O00716 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
E2F3O00716 RNU6-1090P-201ENST00000364065 94 ntBASIC2.24□□□□□ -2.05
E2F3O00716 Y_RNA.402-201ENST00000383972 102 ntBASIC2.24□□□□□ -2.05
E2F3O00716 RNU6-434P-201ENST00000384376 107 ntBASIC2.24□□□□□ -2.05
E2F3O00716 MIR518D-201ENST00000385014 87 ntBASIC2.24□□□□□ -2.05
E2F3O00716 MIR10A-201ENST00000385043 110 ntBASIC2.24□□□□□ -2.05
E2F3O00716 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
E2F3O00716 MIR548F1-201ENST00000408667 84 ntBASIC2.24□□□□□ -2.05
E2F3O00716 AL356379.1-201ENST00000414105 126 ntBASIC2.24□□□□□ -2.05
E2F3O00716 PGBD4P6-201ENST00000421501 610 ntBASIC2.24□□□□□ -2.05
E2F3O00716 MTCO1P20-201ENST00000425366 358 ntBASIC2.24□□□□□ -2.05
E2F3O00716 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.24□□□□□ -2.05
E2F3O00716 AL356320.1-201ENST00000429616 163 ntBASIC2.24□□□□□ -2.05
E2F3O00716 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.24□□□□□ -2.05
E2F3O00716 AL627311.1-201ENST00000431514 115 ntBASIC2.24□□□□□ -2.05
E2F3O00716 SEPT14P3-201ENST00000439401 183 ntBASIC2.24□□□□□ -2.05
E2F3O00716 AL732372.2-207ENST00000445840 183 ntBASIC2.24□□□□□ -2.05
E2F3O00716 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.24□□□□□ -2.05
E2F3O00716 SEPT14P2-201ENST00000453405 183 ntBASIC2.24□□□□□ -2.05
E2F3O00716 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.24□□□□□ -2.05
E2F3O00716 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms