Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU6-45P-201ENST00000384471 107 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 MIR10A-201ENST00000385043 110 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 MIR514A2-201ENST00000385131 88 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 MIR514A3-201ENST00000385132 88 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 SNORD37.1-201ENST00000390968 65 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 MRPS10P2-201ENST00000431226 381 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 USP9YP28-201ENST00000435142 589 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 IPO7P1-201ENST00000442031 636 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 MTCO3P38-201ENST00000468910 766 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 RPL39P5-202ENST00000512505 151 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 SNORA25.11-201ENST00000515935 105 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 Y_RNA.665-201ENST00000516177 98 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 SCARNA17.1-201ENST00000516211 143 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 SNORA31.6-201ENST00000516241 130 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 SCARNA17.2-201ENST00000516334 143 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 BTF3P12-201ENST00000519620 469 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AP003034.1-201ENST00000534621 422 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 MIR1273C-201ENST00000578669 77 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AL355877.2-201ENST00000603670 358 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AL121757.2-201ENST00000611223 313 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 SCARNA17.4-201ENST00000614296 143 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 uc_338.34-201ENST00000617467 174 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AL449363.1-201ENST00000617815 186 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AC090617.10-201ENST00000624308 134 ntBASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.95□□□□□ -2.1
TRIM49D1C9J1S8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 RNY4P14-201ENST00000363656 96 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 RNY3P3-201ENST00000363816 102 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 RNU4-66P-201ENST00000365199 138 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 SNORA67.3-201ENST00000384366 140 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 SNORA64-201ENST00000384674 134 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 MIR181A1-201ENST00000385026 110 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 SNORD73A-201ENST00000386062 65 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 RNA5SP219-201ENST00000390940 113 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 CIR1P3-201ENST00000405137 479 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AL606923.1-201ENST00000406616 190 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 RN7SKP32-201ENST00000410167 303 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 RNA5SP425-201ENST00000410336 112 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 RNU6-1328P-201ENST00000410938 106 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 USP9YP18-201ENST00000425912 695 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 CALM1P1-201ENST00000442082 433 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 PRPS1P1-201ENST00000445305 876 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AC114786.4-201ENST00000508771 728 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 Y_RNA.687-201ENST00000516558 91 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AC006199.1-201ENST00000548728 219 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 ANP32BP3-201ENST00000559213 706 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 BNIP3P25-201ENST00000596023 559 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AP003465.2-201ENST00000602571 373 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AL138889.2-201ENST00000603883 242 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AC092794.1-201ENST00000612734 582 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AC097372.5-201ENST00000623665 376 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 AC005609.4-201ENST00000625071 447 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 FER-210ENST00000628534 558 ntTSL 5 BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 MIR3662-201ENST00000637030 95 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 MIR7515-201ENST00000637837 67 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 OR4G1P-203ENST00000641984 1631 ntBASIC1.94□□□□□ -2.1
TRIM49D1C9J1S8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 SNORA38-201ENST00000363946 132 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 Y_RNA.402-201ENST00000383972 102 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 RNU6-332P-201ENST00000391193 108 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 MIR888-201ENST00000401186 77 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 RN7SKP223-201ENST00000410582 62 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 RNU4-46P-201ENST00000410818 138 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 Y_RNA.623-201ENST00000411128 95 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 AL135786.1-201ENST00000415892 214 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 AL356320.1-201ENST00000429616 163 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 RBMX2P4-201ENST00000441256 376 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 AL078601.1-201ENST00000444542 271 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 SNRPFP3-201ENST00000457792 225 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 AC022364.2-201ENST00000457963 554 ntBASIC1.93□□□□□ -2.1
TRIM49D1C9J1S8 RNU7-66P-201ENST00000459469 62 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms