Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 AC022080.3-201ENST00000544433 482 ntBASIC1.91□□□□□ -2.1
TRBV7-9A0A0J9YWB2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.91□□□□□ -2.1
TRBV7-9A0A0J9YWB2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.91□□□□□ -2.1
TRBV7-9A0A0J9YWB2 AC012557.2-201ENST00000605919 418 ntBASIC1.91□□□□□ -2.1
TRBV7-9A0A0J9YWB2 AL121757.2-201ENST00000611223 313 ntBASIC1.91□□□□□ -2.1
TRBV7-9A0A0J9YWB2 YWHAEP7-203ENST00000622054 312 ntBASIC1.91□□□□□ -2.1
TRBV7-9A0A0J9YWB2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TRBV7-9A0A0J9YWB2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TRBV7-9A0A0J9YWB2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TRBV7-9A0A0J9YWB2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRBV7-9A0A0J9YWB2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.9□□□□□ -2.1
TRBV7-9A0A0J9YWB2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU6-525P-201ENST00000363685 104 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU6-944P-201ENST00000364023 107 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU6-43P-201ENST00000384302 107 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 SNORA51.11-201ENST00000384442 131 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 SNORA44-201ENST00000384584 132 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 MIR561-201ENST00000385216 97 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AL590002.1-201ENST00000406554 418 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 USP9YP20-201ENST00000419224 558 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RPL7P49-201ENST00000471402 708 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU5F-2P-201ENST00000516066 82 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU6-1281P-201ENST00000516223 105 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU7-193P-201ENST00000516723 65 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 CYCSP27-201ENST00000527643 293 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC243972.3-201ENST00000539655 198 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 HMGB1P33-201ENST00000563485 527 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 MIR3126-201ENST00000577443 74 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 MIR3941-201ENST00000582572 103 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 ELOCP29-201ENST00000588193 334 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 BNIP3P16-201ENST00000589779 534 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC078899.2-201ENST00000595282 212 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 ELOCP5-201ENST00000604924 333 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AL160281.1-201ENST00000605307 311 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC004492.1-201ENST00000607036 742 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC092807.2-201ENST00000609367 243 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AL162373.1-201ENST00000620433 407 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
TRBV7-9A0A0J9YWB2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU6-1090P-201ENST00000364065 94 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU1-112P-201ENST00000364401 164 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 SNORA18.3-201ENST00000384122 132 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 SNORA41-201ENST00000384675 132 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 SNORA46.1-201ENST00000391069 153 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 TIMM9P3-201ENST00000428659 274 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 C8orf59P1-201ENST00000429930 303 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU7-138P-201ENST00000459479 64 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RPS27P27-201ENST00000498779 255 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU6-965P-201ENST00000516721 96 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU6-323P-201ENST00000521915 107 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 COPS8P3-201ENST00000526024 482 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC118273.2-201ENST00000532092 465 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC025423.5-201ENST00000550230 219 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AL357078.3-201ENST00000607528 618 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC087241.4-201ENST00000612441 480 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 ATP5A1P2-202ENST00000616464 443 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC103705.1-201ENST00000619013 241 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 SDR42E1P4-201ENST00000620894 481 ntBASIC1.89□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU6-859P-201ENST00000362728 107 ntBASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU6-1285P-201ENST00000363480 105 ntBASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU6-82P-201ENST00000363970 107 ntBASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 U8.8-201ENST00000365399 135 ntBASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 SNORA48.7-201ENST00000391302 135 ntBASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RPS29P13-201ENST00000402041 169 ntBASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNU2-32P-201ENST00000411193 191 ntBASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 RNA5SP270-201ENST00000411361 118 ntBASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 HMGB3P2-201ENST00000411913 584 ntBASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 EDDM3CP-201ENST00000415977 425 ntBASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC105272.1-201ENST00000438604 198 ntBASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.88□□□□□ -2.11
TRBV7-9A0A0J9YWB2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms