Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 MTND2P4-201ENST00000445034 1004 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 RNU6-333P-201ENST00000459117 107 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 AC009646.1-201ENST00000510455 318 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 RNU2-10P-201ENST00000516375 211 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 SNORA43.2-201ENST00000516652 128 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 RNU6-467P-201ENST00000517027 110 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 AC002400.1-201ENST00000569310 726 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 AC005786.1-201ENST00000588553 154 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 AL138955.1-201ENST00000622881 1040 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 AC022513.1-201ENST00000624512 117 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 MIR302D-201ENST00000362275 68 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 RNU5E-10P-201ENST00000363506 118 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 SNORA62.1-201ENST00000364287 154 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 SNORD114-6-201ENST00000364393 72 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 BTF3L4P1-201ENST00000413813 468 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 AL669831.1-202ENST00000428504 417 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 AL365400.1-201ENST00000431854 640 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 RPL23AP35-201ENST00000451906 501 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 AC006026.2-201ENST00000457376 180 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 AC104982.1-201ENST00000478775 574 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 RN7SKP179-201ENST00000516126 217 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 AL353778.1-201ENST00000603149 408 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 AC063943.3-201ENST00000615562 356 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 AL590240.4-201ENST00000616908 390 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 AC130454.1-201ENST00000622948 401 ntBASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
HDGFL3Q9Y3E1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 RNU6-112P-201ENST00000363599 104 ntBASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 RPL23AP30-201ENST00000432419 501 ntBASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 Y_RNA.687-201ENST00000516558 91 ntBASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 RNU6-1003P-201ENST00000517099 105 ntBASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 AC123904.2-201ENST00000548059 300 ntBASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 BNIP3P6-201ENST00000549284 499 ntBASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 AC005668.1-201ENST00000571142 476 ntBASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 MIR4307-201ENST00000582802 84 ntBASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 AC080013.3-201ENST00000606839 578 ntBASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.05□□□□□ -2.24
HDGFL3Q9Y3E1 RNU6-939P-201ENST00000384634 107 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 RNU6-1000P-201ENST00000391066 106 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 Y_RNA.595-201ENST00000410403 105 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 RNU4-22P-201ENST00000411058 166 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AC019070.1-201ENST00000415008 1024 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AL591704.2-201ENST00000421658 181 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 Z82205.1-201ENST00000428456 297 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 MTND5P25-201ENST00000430499 799 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AL603825.1-201ENST00000438481 80 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AC079448.1-201ENST00000449377 373 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 SNRPFP4-201ENST00000456366 242 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 DUXAP8-207ENST00000456786 622 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 RNU1-131P-201ENST00000458943 161 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 RPS26P55-201ENST00000471178 356 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 RNU6-201P-201ENST00000517100 61 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 MIR4498-201ENST00000577599 66 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AL136363.2-201ENST00000604173 851 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 U6.42-201ENST00000618440 107 ntBASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.04□□□□□ -2.24
HDGFL3Q9Y3E1 RNU6-384P-201ENST00000364900 104 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 RNU6-296P-201ENST00000384608 107 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AL353777.1-201ENST00000425552 326 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 AL022238.1-201ENST00000442557 355 ntBASIC1.03□□□□□ -2.24
HDGFL3Q9Y3E1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms