Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FNDC3AQ9Y2H6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FNDC3AQ9Y2H6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.31□□□□□ -1.72
FNDC3AQ9Y2H6 ZNF204P-201ENST00000416749 2397 ntBASIC4.31□□□□□ -1.72
FNDC3AQ9Y2H6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 AC092268.1-201ENST00000342691 405 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 SNORA31-201ENST00000362607 130 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 Y_RNA.240-201ENST00000364469 95 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 Y_RNA.291-201ENST00000364886 113 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 SNORA72.2-201ENST00000365028 127 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 SNORD66.1-201ENST00000391230 76 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 AC024067.1-201ENST00000426199 223 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 AC112220.1-201ENST00000434628 355 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 SNORD2.1-201ENST00000458762 69 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 RNA5SP49-201ENST00000516450 115 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 CKS1BP7-201ENST00000522230 235 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 NACAP3-201ENST00000552100 481 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 MIR4308-201ENST00000580634 81 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 MIR3145-201ENST00000580727 82 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 AC022441.3-201ENST00000605737 136 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 AC073349.3-201ENST00000617616 186 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.3□□□□□ -1.72
FNDC3AQ9Y2H6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 MTND5P35-201ENST00000557537 1720 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 RNA5SP513-201ENST00000364648 118 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 SNORA62.3-201ENST00000365110 153 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 RNA5SP372-201ENST00000390836 115 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 RPL21P17-201ENST00000397467 475 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 Y_RNA.597-201ENST00000410463 100 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 BPY2DP-201ENST00000422208 265 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 AC019205.3-201ENST00000424573 156 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 AC005300.1-201ENST00000428401 373 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 RNU6-625P-201ENST00000459412 107 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 RNU7-200P-201ENST00000516105 62 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 RNU6-1219P-201ENST00000516143 112 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 RNA5SP519-201ENST00000516480 119 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 RNA5SP54-201ENST00000516951 92 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 RPL23AP97-201ENST00000568955 471 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 MTND6P33-201ENST00000571794 183 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 MIR3144-201ENST00000579460 79 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 AC004832.4-201ENST00000608952 331 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 AC092628.2-201ENST00000622492 339 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 MIR3529-201ENST00000637713 78 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 RBBP8P1-201ENST00000449447 1844 ntBASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
FNDC3AQ9Y2H6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 Y_RNA.101-201ENST00000363154 102 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 RNA5SP197-201ENST00000363357 119 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 CYCSP19-201ENST00000411715 316 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 AL162151.2-201ENST00000448875 158 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 AC005042.3-201ENST00000453230 174 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 RPS29P19-201ENST00000479709 171 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 RNU5F-8P-201ENST00000515941 111 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 ACA59.2-201ENST00000517061 156 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 AC100770.1-201ENST00000532310 322 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 AC006199.1-201ENST00000548728 219 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 AC018448.1-201ENST00000552843 316 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 AC233702.2-202ENST00000562547 291 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 MIR6875-201ENST00000617506 72 ntBASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
FNDC3AQ9Y2H6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms