Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
LHX6Q9UPM6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LHX6Q9UPM6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LHX6Q9UPM6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LHX6Q9UPM6 AC100757.1-201ENST00000616872 1835 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LHX6Q9UPM6 RNU6-776P-201ENST00000364403 104 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 RNU6-1022P-201ENST00000365049 104 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 RNU6-1240P-201ENST00000365155 104 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 SNORA1.3-201ENST00000384676 136 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 Z98745.1-201ENST00000402553 494 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 AL356535.1-201ENST00000440335 398 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.98□□□□□ -1.61
LHX6Q9UPM6 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 RPL23AP67-201ENST00000465341 474 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 AC010598.1-201ENST00000510378 103 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 IGKV1-32-201ENST00000519290 311 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.98□□□□□ -1.61
LHX6Q9UPM6 AC022254.1-201ENST00000567857 235 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LHX6Q9UPM6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LHX6Q9UPM6 AP001029.2-203ENST00000589795 4910 ntBASIC4.98□□□□□ -1.61
LHX6Q9UPM6 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LHX6Q9UPM6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LHX6Q9UPM6 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LHX6Q9UPM6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LHX6Q9UPM6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LHX6Q9UPM6 RNY3P2-201ENST00000362918 102 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 SNORA73.1-201ENST00000363107 205 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 RNU1-146P-201ENST00000364015 165 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 Y_RNA.313-201ENST00000365095 103 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 Y_RNA.344-201ENST00000365381 112 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 RNU6-979P-201ENST00000383896 107 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 RNU6-1181P-201ENST00000384191 106 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 RNU6-675P-201ENST00000384236 104 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 MIR600-201ENST00000385007 98 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 RNA5SP171-201ENST00000391071 115 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 AC007161.1-204ENST00000423039 460 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 EIF4EP4-201ENST00000424916 578 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 AC023424.1-201ENST00000496058 459 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 AC145146.1-201ENST00000496370 254 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 RNU6-63P-201ENST00000516690 95 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 AC106785.1-201ENST00000565935 262 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 MIR4458-201ENST00000578872 75 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 AL139124.1-201ENST00000609123 421 ntBASIC4.97□□□□□ -1.61
LHX6Q9UPM6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LHX6Q9UPM6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.97□□□□□ -1.61
LHX6Q9UPM6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LHX6Q9UPM6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
LHX6Q9UPM6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.96□□□□□ -1.61
LHX6Q9UPM6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LHX6Q9UPM6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LHX6Q9UPM6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LHX6Q9UPM6 RNU6-249P-201ENST00000363016 102 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 SNORA70.4-201ENST00000365509 134 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 RNA5SP511-201ENST00000410487 115 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 AC245291.1-201ENST00000419501 328 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 NDUFB4P6-201ENST00000436819 366 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 snoU13.14-201ENST00000459372 104 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 RPS26P48-201ENST00000491713 339 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 AC140172.1-201ENST00000502928 141 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 RNA5SP20-201ENST00000515976 84 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 RNU6-240P-201ENST00000516098 97 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 RNY4P20-201ENST00000516678 93 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 AP001781.1-201ENST00000530977 207 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 MIR4691-201ENST00000583764 85 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.96□□□□□ -1.62
LHX6Q9UPM6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LHX6Q9UPM6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.96□□□□□ -1.62
LHX6Q9UPM6 AL031595.2-201ENST00000624215 19071 ntBASIC4.96□□□□□ -1.62
LHX6Q9UPM6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
LHX6Q9UPM6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
LHX6Q9UPM6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LHX6Q9UPM6 AC144833.1-201ENST00000567953 4089 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.95□□□□□ -1.62
LHX6Q9UPM6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LHX6Q9UPM6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LHX6Q9UPM6 RN7SKP145-201ENST00000363291 303 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 Y_RNA.796-201ENST00000364268 102 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 Y_RNA.799-201ENST00000364992 102 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 MIR105-1-201ENST00000385222 81 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 TOMM22P1-201ENST00000418578 312 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.95□□□□□ -1.62
LHX6Q9UPM6 GNG5P5-201ENST00000420444 220 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.95□□□□□ -1.62
LHX6Q9UPM6 SNORD65B-201ENST00000459126 73 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 COX6B1P5-201ENST00000509843 249 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 RNU6-1018P-201ENST00000516577 106 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 SCARNA15-202ENST00000516881 127 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 RN7SKP260-201ENST00000516907 149 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 AC007224.1-201ENST00000564410 144 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 MIR5588-201ENST00000581890 63 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 RPL17P51-201ENST00000605218 238 ntBASIC4.95□□□□□ -1.62
LHX6Q9UPM6 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LHX6Q9UPM6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.95□□□□□ -1.62
LHX6Q9UPM6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms