Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 AC006445.1-201ENST00000491925 405 ntBASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 RPS27AP10-201ENST00000496103 208 ntBASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 AC097462.2-201ENST00000504623 481 ntBASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 VWA8P1-201ENST00000510889 176 ntBASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 SNORA40.15-201ENST00000516884 107 ntBASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 RNU6-1271P-201ENST00000517049 105 ntBASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 AC104581.2-201ENST00000572227 430 ntBASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 MTND4LP5-201ENST00000605152 292 ntBASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 AC024581.2-201ENST00000619986 252 ntBASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 AC243829.7-201ENST00000633081 225 ntBASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 AC233981.2-201ENST00000611524 1614 ntBASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.13□□□□□ -1.75
ZNRF3Q9ULT6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 MIR422A-201ENST00000362286 90 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 RNU6-942P-201ENST00000363002 107 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 Y_RNA.276-201ENST00000364732 109 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 Y_RNA.512-201ENST00000384518 102 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 SNORA12.2-201ENST00000391040 156 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 MIR190B-201ENST00000401119 79 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 AC099548.1-201ENST00000421443 426 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 USP9YP16-201ENST00000430287 407 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 RPS29P31-201ENST00000446147 164 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 AC012308.1-201ENST00000451232 178 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 USP9YP23-201ENST00000455085 407 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 RNU7-87P-201ENST00000459343 62 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 RPL23AP78-201ENST00000599928 470 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 AL159153.1-201ENST00000619688 317 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
ZNRF3Q9ULT6 AC010733.2-201ENST00000589496 5702 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 AL365361.1-201ENST00000566942 3481 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 U3.13-201ENST00000364804 214 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 RNU6-1280P-201ENST00000365211 107 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 RNU1-100P-201ENST00000365255 165 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 Y_RNA.405-201ENST00000383979 100 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 RNU6-968P-201ENST00000384076 107 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 Y_RNA.451-201ENST00000384200 100 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 Y_RNA.476-201ENST00000384347 108 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 Y_RNA.524-201ENST00000384564 100 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 Y_RNA.561-201ENST00000384694 100 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 IGHV3-76-201ENST00000522465 295 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 MIR3609-201ENST00000582661 80 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 AC060766.3-201ENST00000591442 263 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 AC103858.2-201ENST00000621471 543 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 ADAM3A-203ENST00000461344 2157 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 TNPO1P3-201ENST00000436471 2662 ntBASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ZNRF3Q9ULT6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 RNU6-874P-201ENST00000362390 105 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 RNA5SP42-201ENST00000364278 115 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 RNU4-9P-201ENST00000364951 139 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 Y_RNA.471-201ENST00000384312 102 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 RNU6-1222P-201ENST00000384615 107 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 RPL21P1-201ENST00000399532 476 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 EIF1AXP1-201ENST00000419267 435 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 SNORA25.11-201ENST00000515935 105 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 RNU6-1143P-201ENST00000516125 104 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 HIGD1AP1-201ENST00000550979 275 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 KLKP1-201ENST00000595979 403 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 AL162713.1-201ENST00000604480 262 ntBASIC4.1□□□□□ -1.75
ZNRF3Q9ULT6 RAC1P9-201ENST00000604990 392 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms