Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SH3BP4Q9P0V3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SH3BP4Q9P0V3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.15□□□□□ -1.9
SH3BP4Q9P0V3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SH3BP4Q9P0V3 FTLP6-201ENST00000355274 422 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 Y_RNA.39-201ENST00000362620 98 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 SNORD50.1-201ENST00000362987 71 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 Y_RNA.389-201ENST00000383924 113 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 Y_RNA.401-201ENST00000383965 117 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-198P-201ENST00000384258 104 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 AL031183.1-201ENST00000457667 207 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 MTND4LP22-201ENST00000508209 276 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 Y_RNA.687-201ENST00000516558 91 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 Y_RNA.721-201ENST00000517207 102 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 MIR5188-201ENST00000583467 113 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 SRGNP1-201ENST00000603392 451 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 AL162713.1-201ENST00000604480 262 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 AC090617.7-201ENST00000623952 126 ntBASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SH3BP4Q9P0V3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AL161912.2-201ENST00000565707 3007 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 U3.6-201ENST00000363622 211 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 Y_RNA.176-201ENST00000363815 109 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-270P-201ENST00000364131 105 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 RNY3P11-201ENST00000364153 102 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 Y_RNA.314-201ENST00000365114 102 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-72P-201ENST00000384285 79 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-933P-201ENST00000384424 107 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-1109P-201ENST00000391187 107 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 SAR1AP2-201ENST00000392696 594 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 RPS29P13-201ENST00000402041 169 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 RPS29P4-201ENST00000414733 161 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 DPH3P2-201ENST00000422618 250 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 EIF4EP2-201ENST00000422816 654 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AC007560.1-201ENST00000426912 237 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 RPS15AP10-201ENST00000432472 382 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 GOT2P5-201ENST00000433995 546 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AC079354.2-201ENST00000453523 154 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 snoU13.28-201ENST00000459235 104 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 RNU7-23P-201ENST00000459465 62 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AC091179.1-201ENST00000461606 579 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-635P-201ENST00000516651 102 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-928P-201ENST00000516876 104 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AC109479.2-201ENST00000517842 174 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AC022616.4-201ENST00000522985 181 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AC005476.1-201ENST00000554427 397 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 MIR4273-201ENST00000582824 84 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 MIR8076-201ENST00000611401 83 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AL021879.1-201ENST00000611756 288 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AC107871.2-201ENST00000612894 502 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 U4.7-201ENST00000638126 106 ntBASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.14□□□□□ -1.91
SH3BP4Q9P0V3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 ZNF72P-201ENST00000425869 1908 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-595P-201ENST00000363944 107 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 RNU6-140P-201ENST00000384566 108 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 MIR518D-201ENST00000385014 87 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 AC133134.1-201ENST00000466800 359 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 RN7SL542P-201ENST00000467147 294 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 SLC25A15P5-201ENST00000508033 253 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 SNORA40.14-201ENST00000516543 86 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 SNORA31.21-201ENST00000517180 77 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 AP005902.1-201ENST00000521358 186 ntBASIC3.13□□□□□ -1.91
SH3BP4Q9P0V3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms