Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RNU6-19P-201ENST00000384718 107 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 MIR583-201ENST00000384846 75 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 MIR10A-201ENST00000385043 110 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 MIR524-201ENST00000385242 87 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 SNORA16.2-201ENST00000390991 127 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 RNU2-20P-201ENST00000410425 191 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 RNA5SP338-201ENST00000410495 85 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 HMGB3P2-201ENST00000411913 584 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 MTCYBP8-201ENST00000422855 651 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 PTGES3P4-201ENST00000426243 356 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 RNU7-180P-201ENST00000459240 63 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AL163973.1-201ENST00000484753 577 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AC107393.1-201ENST00000512403 346 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 SNORA40.12-201ENST00000516329 111 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 RNU6-1178P-201ENST00000516674 107 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 BTF3P12-201ENST00000519620 469 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 OR5AQ1P-201ENST00000527596 927 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AC022880.1-201ENST00000534017 973 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AC110588.1-201ENST00000559699 137 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 MIR5692A1-201ENST00000580523 69 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 MIR4424-201ENST00000585257 86 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AL158827.2-201ENST00000602494 330 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AC092954.2-201ENST00000609103 430 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AL158209.2-201ENST00000619266 216 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 RMST_7.1-201ENST00000621935 268 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AL691447.3-201ENST00000635020 330 ntBASIC2.22□□□□□ -2.05
RNF41Q9H4P4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RNF41Q9H4P4 AC009487.4-201ENST00000624969 3585 ntBASIC2.21□□□□□ -2.05
RNF41Q9H4P4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.21□□□□□ -2.06
RNF41Q9H4P4 OR56A5-201ENST00000340110 738 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 RNU6-552P-201ENST00000362869 119 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RNF41Q9H4P4 U8.13-201ENST00000390842 128 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 MTCO3P40-201ENST00000392516 676 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.21□□□□□ -2.06
RNF41Q9H4P4 CALM1P1-201ENST00000442082 433 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 AL354685.2-201ENST00000448218 1447 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 RNU7-26P-201ENST00000458980 63 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.21□□□□□ -2.06
RNF41Q9H4P4 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.21□□□□□ -2.06
RNF41Q9H4P4 LRRC34P2-201ENST00000514850 553 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 RNU2-69P-201ENST00000516061 100 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 MIR892C-201ENST00000516410 77 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.21□□□□□ -2.06
RNF41Q9H4P4 uc_338.14-201ENST00000613162 166 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 AL354950.2-201ENST00000617939 290 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.21□□□□□ -2.06
RNF41Q9H4P4 AL359880.1-201ENST00000621879 266 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.21□□□□□ -2.06
RNF41Q9H4P4 AC139792.3-201ENST00000623525 224 ntBASIC2.21□□□□□ -2.06
RNF41Q9H4P4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.21□□□□□ -2.06
RNF41Q9H4P4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RNF41Q9H4P4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.06
RNF41Q9H4P4 AC010329.5-201ENST00000623497 2174 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RNF41Q9H4P4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.2□□□□□ -2.06
RNF41Q9H4P4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RNF41Q9H4P4 Y_RNA.255-201ENST00000364581 97 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 RNU6-1303P-201ENST00000364841 107 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 RNU6-996P-201ENST00000365438 107 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 RNU6-517P-201ENST00000384362 110 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 RNU6-748P-201ENST00000384648 107 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 SNORD70.1-201ENST00000391007 85 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.2□□□□□ -2.06
RNF41Q9H4P4 PGBD4P6-201ENST00000421501 610 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AC016691.1-201ENST00000441321 413 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.2□□□□□ -2.06
RNF41Q9H4P4 SCARNA18-201ENST00000459004 134 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 RNU7-63P-201ENST00000459054 62 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AP001324.2-201ENST00000461163 319 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AC019235.1-201ENST00000503847 207 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AC091435.1-201ENST00000505442 584 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 RNU5B-3P-201ENST00000516601 115 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 RNU6-835P-201ENST00000516974 104 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AP001893.2-201ENST00000526949 202 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AL137161.1-201ENST00000532231 390 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 HIF1AP1-201ENST00000553642 175 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.2□□□□□ -2.06
RNF41Q9H4P4 MIR5583-1-201ENST00000580941 59 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 AC012507.3-201ENST00000603556 477 ntBASIC2.2□□□□□ -2.06
RNF41Q9H4P4 HMGB1P24-202ENST00000615653 685 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms