Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRCH3Q96II8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.07□□□□□ -1.6
LRCH3Q96II8 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.07□□□□□ -1.6
LRCH3Q96II8 AL161713.1-201ENST00000555538 145 ntBASIC5.07□□□□□ -1.6
LRCH3Q96II8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.07□□□□□ -1.6
LRCH3Q96II8 AC025754.2-201ENST00000606491 432 ntBASIC5.07□□□□□ -1.6
LRCH3Q96II8 AC096577.2-201ENST00000611455 153 ntBASIC5.07□□□□□ -1.6
LRCH3Q96II8 AL021997.2-201ENST00000615674 271 ntBASIC5.07□□□□□ -1.6
LRCH3Q96II8 AC112484.5-201ENST00000624189 228 ntBASIC5.07□□□□□ -1.6
LRCH3Q96II8 U2.21-201ENST00000637295 81 ntBASIC5.07□□□□□ -1.6
LRCH3Q96II8 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRCH3Q96II8 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.07□□□□□ -1.6
LRCH3Q96II8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LRCH3Q96II8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRCH3Q96II8 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.06□□□□□ -1.6
LRCH3Q96II8 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
LRCH3Q96II8 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRCH3Q96II8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.06□□□□□ -1.6
LRCH3Q96II8 MIR383-201ENST00000362257 73 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 Y_RNA.85-201ENST00000363014 111 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 MIR659-201ENST00000384963 97 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 U3.26-201ENST00000391236 204 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 NDUFB4P4-201ENST00000404822 243 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 AC109327.2-201ENST00000448339 378 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 RN7SL98P-201ENST00000462271 300 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 AC117454.1-201ENST00000491120 168 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 SNORD116-26-201ENST00000516006 96 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 CYP4A27P-201ENST00000567218 190 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 RN7SL703P-201ENST00000578485 302 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 MIR548AY-201ENST00000617669 107 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 U6.115-201ENST00000636045 103 ntBASIC5.06□□□□□ -1.6
LRCH3Q96II8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LRCH3Q96II8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.06□□□□□ -1.6
LRCH3Q96II8 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRCH3Q96II8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRCH3Q96II8 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LRCH3Q96II8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC5.06□□□□□ -1.6
LRCH3Q96II8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LRCH3Q96II8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.05□□□□□ -1.6
LRCH3Q96II8 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.05□□□□□ -1.6
LRCH3Q96II8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRCH3Q96II8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRCH3Q96II8 RNA5SP513-201ENST00000364648 118 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 SNORA71.2-201ENST00000364941 134 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 SNORA36B-201ENST00000410438 131 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 EIF4A1P3-201ENST00000411521 244 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.05□□□□□ -1.6
LRCH3Q96II8 snoMBII-202.2-201ENST00000517263 86 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 AC006349.1-201ENST00000555526 235 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 AL162713.1-201ENST00000604480 262 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 MIR6867-201ENST00000610636 67 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 AC099778.2-201ENST00000610904 211 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 AL442128.1-201ENST00000615151 90 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 AC012314.7-201ENST00000619693 93 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
LRCH3Q96II8 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LRCH3Q96II8 ZNF137P-201ENST00000456718 1920 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.05□□□□□ -1.6
LRCH3Q96II8 AL672167.1-204ENST00000641875 3017 ntBASIC5.05□□□□□ -1.6
LRCH3Q96II8 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRCH3Q96II8 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRCH3Q96II8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 RNU6-778P-201ENST00000363269 103 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 RNA5SP223-201ENST00000365174 120 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 RN7SKP267-201ENST00000410381 285 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 AC004866.1-201ENST00000411748 78 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 RPS3AP1-201ENST00000413190 320 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 AL691449.1-201ENST00000426570 421 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 RPL39P40-201ENST00000445481 146 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 AL133547.1-201ENST00000448546 220 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 RPS17P2-201ENST00000461663 408 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 RPL21P10-201ENST00000463521 490 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 AC110768.1-201ENST00000509222 400 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 RN7SKP43-201ENST00000516173 320 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 RNU7-115P-201ENST00000516433 55 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 RNU4-60P-201ENST00000517239 135 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC5.04□□□□□ -1.6
LRCH3Q96II8 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LRCH3Q96II8 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRCH3Q96II8 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRCH3Q96II8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRCH3Q96II8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.03□□□□□ -1.6
LRCH3Q96II8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.03□□□□□ -1.6
LRCH3Q96II8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.03□□□□□ -1.6
LRCH3Q96II8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.03□□□□□ -1.6
LRCH3Q96II8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRCH3Q96II8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms