Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
VTI1AQ96AJ9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VTI1AQ96AJ9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VTI1AQ96AJ9 RNU6-746P-201ENST00000384112 109 ntBASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 SNORA19-201ENST00000384737 128 ntBASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 MIR10B-201ENST00000385011 110 ntBASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 AL033519.2-201ENST00000403958 392 ntBASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 AC024405.2-202ENST00000532731 184 ntBASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 UBL5P4-201ENST00000562584 236 ntBASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 MIR4423-201ENST00000580922 80 ntBASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 SNORD113-5-201ENST00000607261 78 ntBASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
VTI1AQ96AJ9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 RNU6-545P-201ENST00000362681 104 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 RNU6-187P-201ENST00000384139 106 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 Y_RNA.464-201ENST00000384282 110 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 RNU6-493P-201ENST00000391321 108 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 FTH1P15-201ENST00000406984 280 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 MIR1179-201ENST00000408703 91 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 HSPE1P12-201ENST00000412576 301 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 AC074117.2-201ENST00000417130 397 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 WARS2P1-201ENST00000429678 537 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 AL500522.2-201ENST00000448562 343 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 RPL37P4-201ENST00000448908 268 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 RNU7-120P-201ENST00000459334 63 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 PPIAP15-201ENST00000479662 484 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 MIR5695-201ENST00000579717 85 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 AL354798.1-201ENST00000622505 329 ntBASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
VTI1AQ96AJ9 CUL1P1-201ENST00000509510 2425 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 RNU6-740P-201ENST00000364734 105 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 Y_RNA.319-201ENST00000365138 92 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 RNU6-326P-201ENST00000365480 107 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 RNU6-281P-201ENST00000384212 103 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 RNU6-541P-201ENST00000384709 110 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 MIR7-3-201ENST00000384898 110 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 MIR449B-201ENST00000384995 97 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 RNU6-651P-201ENST00000411040 105 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 RNU6-1001P-201ENST00000411265 100 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 AC125238.1-201ENST00000448842 249 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 HMGB3P8-201ENST00000449709 577 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 AC073901.1-201ENST00000462471 408 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 SNRPGP7-201ENST00000469016 106 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 RN7SL585P-201ENST00000470538 280 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 AC097462.2-201ENST00000504623 481 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 SEPT14P8-201ENST00000508026 178 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 SNORD116-28-201ENST00000516123 91 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 RN7SKP49-201ENST00000516675 260 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 RNU2-31P-201ENST00000516954 155 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 AP002392.1-201ENST00000537692 208 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 CR383656.8-201ENST00000549046 145 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 AC019159.1-201ENST00000605094 187 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 AC005296.1-201ENST00000616145 209 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 AF117829.1-206ENST00000621883 3802 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 AC012442.3-202ENST00000636742 206 ntBASIC4.63□□□□□ -1.67
VTI1AQ96AJ9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 SNORA36A-201ENST00000384221 132 ntBASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 SNORA53-201ENST00000391141 249 ntBASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 MTHFD2P2-201ENST00000407725 247 ntBASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 Y_RNA.626-201ENST00000411288 95 ntBASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 RNA5SP246-201ENST00000458909 119 ntBASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 MRPL42P6-201ENST00000486397 371 ntBASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 RPS27AP10-201ENST00000496103 208 ntBASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 RNU6-567P-201ENST00000516746 107 ntBASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 MIR5571-201ENST00000577998 113 ntBASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 AC069200.1-201ENST00000609511 323 ntBASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.62□□□□□ -1.67
VTI1AQ96AJ9 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms