Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 AL591043.1-201ENST00000432461 424 ntBASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 AC007969.2-201ENST00000441891 191 ntBASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 SNORA31.6-201ENST00000516241 130 ntBASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 CKS1BP7-201ENST00000522230 235 ntBASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 AC010186.2-204ENST00000537668 439 ntBASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 AC104237.2-201ENST00000612456 443 ntBASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 Y_RNA.804-201ENST00000615262 101 ntBASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 AC244517.12-201ENST00000623581 663 ntBASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 MTND4P23-201ENST00000447723 1363 ntBASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
CCDC33Q8N5R6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 RNU6-527P-201ENST00000363425 104 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 SNORA51.4-201ENST00000364993 124 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 SNORD15B-201ENST00000384714 146 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 MIR548F5-201ENST00000408421 86 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 AL030996.1-201ENST00000411430 235 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 AC245054.2-201ENST00000415639 319 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 AL441985.1-201ENST00000457727 251 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 RNU7-187P-201ENST00000458985 68 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 AP001324.2-201ENST00000461163 319 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 RN7SL20P-201ENST00000488827 297 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 SEM1P1-201ENST00000506694 209 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 FGF7P4-201ENST00000509595 295 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 SCARNA17.1-201ENST00000516211 143 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 SCARNA17.2-201ENST00000516334 143 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 SCARNA11.3-201ENST00000517276 130 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 GLYCAM1-201ENST00000546596 285 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 AC090897.2-201ENST00000581715 130 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 RPL23AP78-201ENST00000599928 470 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 AC243960.4-201ENST00000600532 288 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 AC019159.1-201ENST00000605094 187 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 SCARNA17.4-201ENST00000614296 143 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 AC097372.5-201ENST00000623665 376 ntBASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC33Q8N5R6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 SNORD56.1-201ENST00000362913 68 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 SNORA54-201ENST00000384281 123 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 RN7SKP158-201ENST00000410453 326 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 RNU6-325P-201ENST00000411132 105 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 AC107083.1-201ENST00000439643 279 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 RPS12P18-201ENST00000442381 270 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 SNRPEP8-201ENST00000442866 260 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 AC093019.1-201ENST00000443135 252 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 RPS26P21-201ENST00000475397 348 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 RN7SKP272-201ENST00000516988 232 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 SNORA31.18-201ENST00000517043 134 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 CPDP1-201ENST00000579660 283 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 AL132765.2-201ENST00000610812 351 ntBASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC33Q8N5R6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 SNORD62.1-201ENST00000362541 86 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 Y_RNA.474-201ENST00000384341 102 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 RNA5SP390-201ENST00000410191 113 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 RNU6-293P-201ENST00000411259 106 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 AC074085.1-201ENST00000413598 418 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 SAR1AP4-201ENST00000429225 591 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 AC104332.2-201ENST00000429959 156 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 AC243964.1-201ENST00000441814 261 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 AC107399.1-201ENST00000451226 265 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 RPL39P5-202ENST00000512505 151 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 RPS15AP11-201ENST00000594193 385 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 AC010620.2-201ENST00000600135 313 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 AL133215.3-201ENST00000609801 448 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 AL161423.1-201ENST00000613700 262 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 AC009233.1-201ENST00000616477 371 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 AC000403.1-201ENST00000613696 3585 ntBASIC3.16□□□□□ -1.9
CCDC33Q8N5R6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC33Q8N5R6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.15□□□□□ -1.9
CCDC33Q8N5R6 AL109809.4-201ENST00000603520 2185 ntBASIC3.15□□□□□ -1.9
CCDC33Q8N5R6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CCDC33Q8N5R6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms