Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU1-100P-201ENST00000365255 165 ntBASIC5.24□□□□□ -1.57
VARS2Q5ST30 MIR1193-201ENST00000408109 78 ntBASIC5.24□□□□□ -1.57
VARS2Q5ST30 EIF4EP4-201ENST00000424916 578 ntBASIC5.24□□□□□ -1.57
VARS2Q5ST30 AC079780.1-201ENST00000428259 207 ntBASIC5.24□□□□□ -1.57
VARS2Q5ST30 RPL36AP21-201ENST00000490372 323 ntBASIC5.24□□□□□ -1.57
VARS2Q5ST30 RNU6-1337P-201ENST00000516525 95 ntBASIC5.24□□□□□ -1.57
VARS2Q5ST30 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.24□□□□□ -1.57
VARS2Q5ST30 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
VARS2Q5ST30 AC040958.1-201ENST00000561102 201 ntBASIC5.24□□□□□ -1.57
VARS2Q5ST30 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.24□□□□□ -1.57
VARS2Q5ST30 uc_338.4-201ENST00000616635 176 ntBASIC5.24□□□□□ -1.57
VARS2Q5ST30 U73479.1-201ENST00000618062 168 ntBASIC5.24□□□□□ -1.57
VARS2Q5ST30 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
VARS2Q5ST30 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VARS2Q5ST30 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VARS2Q5ST30 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VARS2Q5ST30 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
VARS2Q5ST30 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VARS2Q5ST30 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VARS2Q5ST30 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
VARS2Q5ST30 AC073136.1-201ENST00000449426 2884 ntBASIC5.23□□□□□ -1.57
VARS2Q5ST30 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.23□□□□□ -1.57
VARS2Q5ST30 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VARS2Q5ST30 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VARS2Q5ST30 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VARS2Q5ST30 RNU6-418P-201ENST00000384035 107 ntBASIC5.23□□□□□ -1.57
VARS2Q5ST30 COX5BP7-201ENST00000414780 274 ntBASIC5.23□□□□□ -1.57
VARS2Q5ST30 EIF4HP2-201ENST00000424380 563 ntBASIC5.23□□□□□ -1.57
VARS2Q5ST30 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.23□□□□□ -1.57
VARS2Q5ST30 RPS17P2-201ENST00000461663 408 ntBASIC5.23□□□□□ -1.57
VARS2Q5ST30 RNU6-513P-201ENST00000516104 104 ntBASIC5.23□□□□□ -1.57
VARS2Q5ST30 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.23□□□□□ -1.57
VARS2Q5ST30 AC136601.2-201ENST00000604356 474 ntBASIC5.23□□□□□ -1.57
VARS2Q5ST30 HOTTIP_4.1-201ENST00000618195 165 ntBASIC5.23□□□□□ -1.57
VARS2Q5ST30 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VARS2Q5ST30 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.23□□□□□ -1.57
VARS2Q5ST30 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARS2Q5ST30 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARS2Q5ST30 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.22□□□□□ -1.57
VARS2Q5ST30 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARS2Q5ST30 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARS2Q5ST30 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARS2Q5ST30 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
VARS2Q5ST30 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARS2Q5ST30 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARS2Q5ST30 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
VARS2Q5ST30 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
VARS2Q5ST30 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.22□□□□□ -1.57
VARS2Q5ST30 RNU6-173P-201ENST00000364215 104 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 Y_RNA.426-201ENST00000384068 113 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 RNA5SP332-201ENST00000391063 115 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 SNORA48.7-201ENST00000391302 135 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 BX510359.2-201ENST00000417920 305 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 RPL23AP82-202ENST00000427528 469 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 RPL23AP7-203ENST00000449021 469 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 CENPBD1P1-201ENST00000464061 469 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC5.22□□□□□ -1.57
VARS2Q5ST30 AC097462.1-201ENST00000514125 324 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 RN7SKP276-201ENST00000516242 268 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 RNU1-117P-201ENST00000517041 158 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.22□□□□□ -1.57
VARS2Q5ST30 SNORD84-203ENST00000584275 78 ntBASIC5.22□□□□□ -1.57
VARS2Q5ST30 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARS2Q5ST30 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.22□□□□□ -1.57
VARS2Q5ST30 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.22□□□□□ -1.57
VARS2Q5ST30 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VARS2Q5ST30 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VARS2Q5ST30 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.21□□□□□ -1.57
VARS2Q5ST30 ZNF137P-201ENST00000456718 1920 ntBASIC5.21□□□□□ -1.57
VARS2Q5ST30 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VARS2Q5ST30 RNA5SP388-201ENST00000362584 119 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 SNORA73.1-201ENST00000363107 205 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 SNORD116-22-201ENST00000384430 92 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 Y_RNA.601-201ENST00000410500 113 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 NDUFB1P1-201ENST00000435191 180 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 AC000111.2-201ENST00000448200 210 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 AC023424.1-201ENST00000496058 459 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 RNU6-162P-201ENST00000516228 103 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 RNU6-267P-201ENST00000516714 103 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 RN7SKP234-201ENST00000517173 224 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 RN7SKP57-201ENST00000517248 293 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 AC005972.2-201ENST00000604690 348 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 AC107294.3-201ENST00000609211 526 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 AL162726.3-218ENST00000636401 95 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VARS2Q5ST30 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VARS2Q5ST30 AC063976.2-201ENST00000425667 3556 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VARS2Q5ST30 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VARS2Q5ST30 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
VARS2Q5ST30 AC103988.1-201ENST00000566382 2177 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 AC004817.4-201ENST00000602396 3625 ntBASIC5.21□□□□□ -1.58
VARS2Q5ST30 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VARS2Q5ST30 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.2□□□□□ -1.58
VARS2Q5ST30 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.2□□□□□ -1.58
VARS2Q5ST30 AL159152.1-201ENST00000635019 2587 ntBASIC5.2□□□□□ -1.58
VARS2Q5ST30 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VARS2Q5ST30 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms