Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC093331.1-201ENST00000521474 169 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AC104027.1-201ENST00000521887 300 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AC115990.1-201ENST00000526957 301 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AL669831.3-213ENST00000636676 183 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AC092435.3-201ENST00000565538 3654 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AL359854.1-201ENST00000614203 1594 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 AL356274.2-201ENST00000624379 3752 ntBASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 RNU1-140P-201ENST00000365040 165 ntBASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 USMG5P1-201ENST00000425964 177 ntBASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 Z82205.1-201ENST00000428456 297 ntBASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 RPL36AP48-201ENST00000485521 314 ntBASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 Y_RNA.670-201ENST00000516255 105 ntBASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 AC109446.1-201ENST00000566172 220 ntBASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 MIR4276-201ENST00000584832 70 ntBASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 AC084781.2-201ENST00000615568 161 ntBASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 MTND4LP32-201ENST00000636111 270 ntBASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 AC009541.1-201ENST00000438279 2662 ntBASIC3.87□□□□□ -1.79
CCDC144BQ3MJ40 Z83843.1-201ENST00000604070 3685 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 Y_RNA.2-201ENST00000362330 96 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 RNU6-142P-201ENST00000384019 107 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 SNORA48.8-201ENST00000391324 134 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 RNU6-174P-201ENST00000410406 106 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 RNU2-23P-201ENST00000410545 195 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 RPL27AP5-201ENST00000469428 449 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 AC009812.2-201ENST00000517657 457 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 GLYCAM1-201ENST00000546596 285 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 MIR4325-201ENST00000583049 90 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 MIR4765-201ENST00000585007 77 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 CYP2C61P-201ENST00000604072 290 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 AL133255.1-201ENST00000606374 441 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 AC135507.2-201ENST00000612443 309 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 AC093010.3-201ENST00000570269 15214 ntBASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC144BQ3MJ40 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 RNU6-784P-201ENST00000384330 106 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 CYCSP48-201ENST00000417124 323 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 AC078809.1-201ENST00000427601 140 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 AC006028.1-201ENST00000438379 402 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 AC006445.1-201ENST00000491925 405 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 AC097473.1-201ENST00000508142 408 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 RNA5SP112-201ENST00000515937 99 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 AC079598.5-201ENST00000547460 117 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 AC016256.1-201ENST00000547971 354 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 MTCO3P13-201ENST00000577757 781 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 MIR5004-201ENST00000579078 107 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 AC006557.5-201ENST00000603126 811 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 SCARNA15.3-201ENST00000626315 122 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 SCARNA4.1-201ENST00000628597 123 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 ZNF826P-207ENST00000622273 1910 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 AC010329.5-201ENST00000623497 2174 ntBASIC3.85□□□□□ -1.79
CCDC144BQ3MJ40 MFSD8-233ENST00000641482 4860 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 AL353743.1-202ENST00000431724 1695 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 AP000560.1-201ENST00000624150 1937 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 SNORD116-29-201ENST00000384516 83 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 AL357075.1-201ENST00000404107 726 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 AL133475.1-201ENST00000404414 305 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 MIR1289-1-201ENST00000408836 144 ntBASIC3.84□□□□□ -1.79
CCDC144BQ3MJ40 AC126124.2-201ENST00000413542 321 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms