Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 RPS29P20-201ENST00000489592 171 ntBASIC4.42□□□□□ -1.7
ECM1Q16610 AC074198.2-201ENST00000508153 258 ntBASIC4.42□□□□□ -1.7
ECM1Q16610 RN7SKP49-201ENST00000516675 260 ntBASIC4.42□□□□□ -1.7
ECM1Q16610 MIR3160-1-201ENST00000577972 85 ntBASIC4.42□□□□□ -1.7
ECM1Q16610 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.42□□□□□ -1.7
ECM1Q16610 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.42□□□□□ -1.7
ECM1Q16610 AL020997.2-201ENST00000602607 184 ntBASIC4.42□□□□□ -1.7
ECM1Q16610 BX284668.6-201ENST00000606899 438 ntBASIC4.42□□□□□ -1.7
ECM1Q16610 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
ECM1Q16610 MIR6500-201ENST00000622700 86 ntBASIC4.42□□□□□ -1.7
ECM1Q16610 AL450472.1-202ENST00000637286 180 ntBASIC4.42□□□□□ -1.7
ECM1Q16610 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
ECM1Q16610 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ECM1Q16610 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.42□□□□□ -1.7
ECM1Q16610 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.41□□□□□ -1.7
ECM1Q16610 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ECM1Q16610 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ECM1Q16610 Y_RNA.83-201ENST00000363005 113 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.41□□□□□ -1.7
ECM1Q16610 SNORA53-201ENST00000391141 249 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 AL079342.1-201ENST00000401460 267 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 PTGES3P4-201ENST00000426243 356 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 AL591419.1-201ENST00000427423 339 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.41□□□□□ -1.7
ECM1Q16610 AC096638.1-201ENST00000444678 216 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 AF186996.7-201ENST00000492781 209 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 SEPT14P8-201ENST00000508026 178 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 RNU6-1278P-201ENST00000516130 107 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 AP002392.1-201ENST00000537692 208 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 GNRHR2P1-201ENST00000555315 631 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 RN7SL703P-201ENST00000578485 302 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 AC090897.2-201ENST00000581715 130 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.41□□□□□ -1.7
ECM1Q16610 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 MIR6875-201ENST00000617506 72 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 AC006111.3-201ENST00000622137 383 ntBASIC4.41□□□□□ -1.7
ECM1Q16610 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ECM1Q16610 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.41□□□□□ -1.7
ECM1Q16610 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ECM1Q16610 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ECM1Q16610 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.4□□□□□ -1.7
ECM1Q16610 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.4□□□□□ -1.7
ECM1Q16610 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
ECM1Q16610 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
ECM1Q16610 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
ECM1Q16610 RNU6-222P-201ENST00000362438 107 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 RNU4-90P-201ENST00000362773 141 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 SNORD115-8-201ENST00000363856 82 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 SNORD115-38-201ENST00000365037 82 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 RNU6-213P-201ENST00000384051 104 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 RNU6-748P-201ENST00000384648 107 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 AC005300.1-201ENST00000428401 373 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 AL445305.1-201ENST00000432577 575 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.4□□□□□ -1.71
ECM1Q16610 SSXP4-201ENST00000451349 245 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 U8.22-201ENST00000459141 133 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 RNU7-23P-201ENST00000459465 62 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 RNA5SP309-201ENST00000516670 106 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ECM1Q16610 MIR3136-201ENST00000583498 78 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 HSPE1P7-201ENST00000604681 321 ntBASIC4.4□□□□□ -1.71
ECM1Q16610 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.4□□□□□ -1.71
ECM1Q16610 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ECM1Q16610 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ECM1Q16610 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ECM1Q16610 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ECM1Q16610 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ECM1Q16610 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ECM1Q16610 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ECM1Q16610 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ECM1Q16610 Y_RNA.277-201ENST00000364754 102 ntBASIC4.39□□□□□ -1.71
ECM1Q16610 Y_RNA.581-201ENST00000391017 97 ntBASIC4.39□□□□□ -1.71
ECM1Q16610 RNU6-159P-201ENST00000391080 106 ntBASIC4.39□□□□□ -1.71
ECM1Q16610 SNORD12B-201ENST00000410433 91 ntBASIC4.39□□□□□ -1.71
ECM1Q16610 COX6CP10-201ENST00000416832 224 ntBASIC4.39□□□□□ -1.71
ECM1Q16610 AC012306.1-201ENST00000423267 114 ntBASIC4.39□□□□□ -1.71
ECM1Q16610 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.39□□□□□ -1.71
ECM1Q16610 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.39□□□□□ -1.71
ECM1Q16610 AC091874.1-201ENST00000511402 339 ntBASIC4.39□□□□□ -1.71
ECM1Q16610 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.39□□□□□ -1.71
ECM1Q16610 MIR4643-201ENST00000577473 78 ntBASIC4.39□□□□□ -1.71
ECM1Q16610 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.39□□□□□ -1.71
ECM1Q16610 SNORD113-5-201ENST00000607261 78 ntBASIC4.39□□□□□ -1.71
ECM1Q16610 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.39□□□□□ -1.71
ECM1Q16610 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.39□□□□□ -1.71
ECM1Q16610 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ECM1Q16610 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
ECM1Q16610 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
ECM1Q16610 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.38□□□□□ -1.71
ECM1Q16610 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.38□□□□□ -1.71
ECM1Q16610 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ECM1Q16610 MIR411-201ENST00000362239 96 ntBASIC4.38□□□□□ -1.71
ECM1Q16610 SNORD113-8-201ENST00000363497 74 ntBASIC4.38□□□□□ -1.71
ECM1Q16610 MIR215-201ENST00000384858 110 ntBASIC4.38□□□□□ -1.71
ECM1Q16610 EI24P2-201ENST00000397776 1076 ntBASIC4.38□□□□□ -1.71
ECM1Q16610 MIR1251-201ENST00000408552 70 ntBASIC4.38□□□□□ -1.71
ECM1Q16610 SNORA11-201ENST00000408789 128 ntBASIC4.38□□□□□ -1.71
ECM1Q16610 RPS26P42-201ENST00000413485 326 ntBASIC4.38□□□□□ -1.71
ECM1Q16610 HMGB1P37-201ENST00000439613 609 ntBASIC4.38□□□□□ -1.71
ECM1Q16610 AL353748.1-201ENST00000440753 474 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms