Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 AL359821.1-201ENST00000605519 182 ntBASIC1.33□□□□□ -2.2
TNNC1P63316 MIR6078-201ENST00000611069 100 ntBASIC1.33□□□□□ -2.2
TNNC1P63316 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
TNNC1P63316 Y_RNA.327-201ENST00000365201 102 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 AC019070.1-201ENST00000415008 1024 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.32□□□□□ -2.2
TNNC1P63316 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.32□□□□□ -2.2
TNNC1P63316 RPS6P15-201ENST00000431996 751 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.32□□□□□ -2.2
TNNC1P63316 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.32□□□□□ -2.2
TNNC1P63316 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 RNU6-333P-201ENST00000459117 107 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.32□□□□□ -2.2
TNNC1P63316 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.32□□□□□ -2.2
TNNC1P63316 AL356057.1-201ENST00000533798 831 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.32□□□□□ -2.2
TNNC1P63316 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.32□□□□□ -2.2
TNNC1P63316 AC022022.2-201ENST00000602989 360 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 AL353778.1-201ENST00000603149 408 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 AC073413.2-201ENST00000604332 360 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 AP001485.1-201ENST00000604799 199 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 AC080013.3-201ENST00000606839 578 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 AC107308.1-201ENST00000615897 301 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 AC233981.2-201ENST00000611524 1614 ntBASIC1.32□□□□□ -2.2
TNNC1P63316 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TNNC1P63316 RNU4-22P-201ENST00000411058 166 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 BTF3L4P1-201ENST00000413813 468 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TNNC1P63316 RPL23AP30-201ENST00000432419 501 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.31□□□□□ -2.2
TNNC1P63316 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.31□□□□□ -2.2
TNNC1P63316 AC087477.1-201ENST00000465747 340 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.31□□□□□ -2.2
TNNC1P63316 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.31□□□□□ -2.2
TNNC1P63316 RNA5SP445-201ENST00000515889 115 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 RNU6-1053P-201ENST00000515930 101 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 SNORA43.2-201ENST00000516652 128 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 RNU6-1003P-201ENST00000517099 105 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 RNU6-201P-201ENST00000517100 61 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.31□□□□□ -2.2
TNNC1P63316 AC005786.1-201ENST00000588553 154 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 U6.42-201ENST00000618440 107 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TNNC1P63316 AC130454.1-201ENST00000622948 401 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.31□□□□□ -2.2
TNNC1P63316 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TNNC1P63316 AC013437.2-201ENST00000639587 677 ntBASIC1.31□□□□□ -2.2
TNNC1P63316 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
TNNC1P63316 RNU4-91P-201ENST00000364778 135 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 RNU2-41P-201ENST00000410991 178 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.3□□□□□ -2.2
TNNC1P63316 AC006366.1-201ENST00000422002 759 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 AL353777.1-201ENST00000425552 326 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 MTND3P1-201ENST00000441336 220 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.3□□□□□ -2.2
TNNC1P63316 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 RPL23AP35-201ENST00000451906 501 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 RPS29P29-201ENST00000456396 171 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 AC098862.1-201ENST00000504991 413 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 AC009646.1-201ENST00000510455 318 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 Y_RNA.687-201ENST00000516558 91 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.3□□□□□ -2.2
TNNC1P63316 AC123904.2-201ENST00000548059 300 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TNNC1P63316 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.3□□□□□ -2.2
TNNC1P63316 AC002400.1-201ENST00000569310 726 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 MIR4307-201ENST00000582802 84 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 AC063943.3-201ENST00000615562 356 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 AL359547.2-201ENST00000615810 418 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 AL590240.4-201ENST00000616908 390 ntBASIC1.3□□□□□ -2.2
TNNC1P63316 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TNNC1P63316 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
TNNC1P63316 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
TNNC1P63316 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TNNC1P63316 RNU6-271P-201ENST00000363858 105 ntBASIC1.29□□□□□ -2.2
TNNC1P63316 SNORA62.1-201ENST00000364287 154 ntBASIC1.29□□□□□ -2.2
TNNC1P63316 SNORD114-6-201ENST00000364393 72 ntBASIC1.29□□□□□ -2.2
TNNC1P63316 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.29□□□□□ -2.2
TNNC1P63316 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.29□□□□□ -2.2
TNNC1P63316 MTND2P4-201ENST00000445034 1004 ntBASIC1.29□□□□□ -2.2
TNNC1P63316 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.29□□□□□ -2.2
TNNC1P63316 TRMT112P2-201ENST00000512910 132 ntBASIC1.29□□□□□ -2.2
TNNC1P63316 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.29□□□□□ -2.2
TNNC1P63316 BNIP3P6-201ENST00000549284 499 ntBASIC1.29□□□□□ -2.2
TNNC1P63316 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.29□□□□□ -2.2
TNNC1P63316 SNORA77B-201ENST00000578179 125 ntBASIC1.29□□□□□ -2.2
TNNC1P63316 AL136363.2-201ENST00000604173 851 ntBASIC1.29□□□□□ -2.2
TNNC1P63316 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
TNNC1P63316 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.29□□□□□ -2.2
TNNC1P63316 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TNNC1P63316 ZNF29P-201ENST00000225587 168 ntBASIC1.28□□□□□ -2.2
TNNC1P63316 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
TNNC1P63316 RNU6-321P-201ENST00000410912 106 ntBASIC1.28□□□□□ -2.2
TNNC1P63316 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.28□□□□□ -2.2
TNNC1P63316 AL669831.1-202ENST00000428504 417 ntBASIC1.28□□□□□ -2.2
TNNC1P63316 MTND5P25-201ENST00000430499 799 ntBASIC1.28□□□□□ -2.2
TNNC1P63316 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms