Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.5□□□□□ -2.17
CLDN6P56747 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.5□□□□□ -2.17
CLDN6P56747 Y_RNA.670-201ENST00000516255 105 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.5□□□□□ -2.17
CLDN6P56747 AL161670.1-201ENST00000554348 137 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 AC090888.2-201ENST00000559765 1144 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.5□□□□□ -2.17
CLDN6P56747 MIR4421-201ENST00000578133 69 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 AC012409.4-201ENST00000612923 249 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 U1.36-201ENST00000620684 176 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CLDN6P56747 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
CLDN6P56747 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CLDN6P56747 snoU2_19.1-201ENST00000362361 80 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 Y_RNA.191-201ENST00000363972 113 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 RNU6-1164P-201ENST00000364428 107 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 RPS3AP36-201ENST00000398190 775 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 RNA5SP390-201ENST00000410191 113 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 RNA5SP501-201ENST00000410990 112 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 AC074117.2-201ENST00000417130 397 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 USP9YP18-201ENST00000425912 695 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 AC119618.1-201ENST00000434191 222 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.49□□□□□ -2.17
CLDN6P56747 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.49□□□□□ -2.17
CLDN6P56747 snoU13.14-201ENST00000459372 104 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 AL049829.1-201ENST00000465411 156 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CLDN6P56747 RNU6-123P-201ENST00000516163 102 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.49□□□□□ -2.17
CLDN6P56747 MIR4452-201ENST00000583004 71 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 AP000811.1-201ENST00000603803 651 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 CYP2C61P-201ENST00000604072 290 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 AL022345.1-201ENST00000607292 135 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 AC103810.8-201ENST00000607347 118 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 AC007792.1-201ENST00000623023 402 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 AL359740.1-201ENST00000624340 592 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CLDN6P56747 MTND5P35-201ENST00000557537 1720 ntBASIC1.49□□□□□ -2.17
CLDN6P56747 RNU1-58P-201ENST00000362413 163 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 SNORD114-22-201ENST00000365423 72 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 RNU6-533P-201ENST00000384144 107 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 MIR7-2-201ENST00000384970 110 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.48□□□□□ -2.17
CLDN6P56747 PGBD4P6-201ENST00000421501 610 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.48□□□□□ -2.17
CLDN6P56747 AC137499.1-201ENST00000427602 88 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.48□□□□□ -2.17
CLDN6P56747 AC004854.1-201ENST00000440356 349 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 AL353752.1-201ENST00000454946 260 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.48□□□□□ -2.17
CLDN6P56747 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.48□□□□□ -2.17
CLDN6P56747 RNU1-123P-201ENST00000458950 160 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 RPL30P12-201ENST00000474666 353 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.48□□□□□ -2.17
CLDN6P56747 ATP5EP1-201ENST00000510257 156 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 SNORA43.2-201ENST00000516652 128 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.48□□□□□ -2.17
CLDN6P56747 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.48□□□□□ -2.17
CLDN6P56747 AC018630.3-201ENST00000542637 96 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.48□□□□□ -2.17
CLDN6P56747 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.48□□□□□ -2.17
CLDN6P56747 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.48□□□□□ -2.17
CLDN6P56747 AC078795.2-201ENST00000602835 1252 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 AL353778.1-201ENST00000603149 408 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 AL391834.2-201ENST00000609982 546 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.48□□□□□ -2.17
CLDN6P56747 OR4G3P-201ENST00000633500 913 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CLDN6P56747 ZNF209P-201ENST00000593450 2304 ntBASIC1.48□□□□□ -2.17
CLDN6P56747 AL391994.1-201ENST00000254724 282 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CLDN6P56747 SNORD56.1-201ENST00000362913 68 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 RNU6-234P-201ENST00000365229 104 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 MIR578-201ENST00000384828 96 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 MTCO2P8-201ENST00000412213 658 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 AL008987.1-201ENST00000415528 237 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 AC114491.1-201ENST00000416095 246 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.47□□□□□ -2.17
CLDN6P56747 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.47□□□□□ -2.17
CLDN6P56747 AL354941.1-201ENST00000438600 464 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 DUXAP8-207ENST00000456786 622 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 AC087884.1-201ENST00000469738 328 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 BZW1P2-201ENST00000473537 826 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.47□□□□□ -2.17
CLDN6P56747 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.47□□□□□ -2.17
CLDN6P56747 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.47□□□□□ -2.17
CLDN6P56747 HSBP1P1-201ENST00000555205 166 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 MIR4999-201ENST00000585029 91 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 AC018714.1-201ENST00000605028 208 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 AL139286.2-201ENST00000606838 396 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.47□□□□□ -2.17
CLDN6P56747 RMST_2.1-201ENST00000617263 136 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 AC099842.1-201ENST00000619919 596 ntBASIC1.47□□□□□ -2.17
CLDN6P56747 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CLDN6P56747 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
CLDN6P56747 AC106754.1-201ENST00000562632 1513 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 MIR96-201ENST00000362288 78 ntBASIC1.46□□□□□ -2.18
CLDN6P56747 RNU6-384P-201ENST00000364900 104 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms