Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMGA2P52926 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMGA2P52926 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMGA2P52926 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGA2P52926 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGA2P52926 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HMGA2P52926 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HMGA2P52926 Y_RNA.182-201ENST00000363880 111 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 Y_RNA.357-201ENST00000365487 109 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGA2P52926 Y_RNA.388-201ENST00000383919 113 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 RPS4XP3-201ENST00000398541 413 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 AC017078.1-201ENST00000416146 368 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 AL096701.2-201ENST00000416920 238 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 AL117339.3-201ENST00000418733 162 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMGA2P52926 MTATP6P4-201ENST00000427725 675 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 AC016700.2-201ENST00000446011 156 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMGA2P52926 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGA2P52926 AP000870.1-201ENST00000472927 406 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGA2P52926 RNU6-390P-201ENST00000516259 103 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 NDUFB9P3-201ENST00000521269 501 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 MIR6730-201ENST00000622213 67 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 AC090617.7-201ENST00000623952 126 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 AC068700.1-201ENST00000565862 3754 ntBASIC3.31□□□□□ -1.88
HMGA2P52926 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMGA2P52926 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMGA2P52926 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGA2P52926 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HMGA2P52926 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGA2P52926 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGA2P52926 PWAR6-201ENST00000552334 4618 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGA2P52926 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGA2P52926 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HMGA2P52926 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGA2P52926 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGA2P52926 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGA2P52926 RNU6-989P-201ENST00000362756 107 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 RNU6-961P-201ENST00000363893 105 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 SNORD73B-201ENST00000364394 72 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 MIR539-201ENST00000365690 78 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGA2P52926 MIR1302-4-201ENST00000408701 150 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 RNA5SP31-201ENST00000411144 127 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 RPL30P13-201ENST00000418873 348 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 RPL17P36-201ENST00000420302 549 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 AC099677.1-201ENST00000420575 175 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 AL591419.1-201ENST00000427423 339 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.3□□□□□ -1.88
HMGA2P52926 RPS20P1-201ENST00000434853 354 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 AL357552.1-201ENST00000445254 415 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 RN7SL594P-201ENST00000470590 287 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 RN7SL323P-201ENST00000494712 295 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGA2P52926 AC110768.1-201ENST00000509222 400 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 RAC1P5-201ENST00000512182 576 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 Y_RNA.706-201ENST00000516933 99 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGA2P52926 AC023575.1-201ENST00000580510 358 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 MIR548AC-201ENST00000585049 88 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGA2P52926 AC060766.3-201ENST00000591442 263 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGA2P52926 AC023043.3-201ENST00000593113 385 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 AL591034.3-201ENST00000605511 685 ntBASIC3.3□□□□□ -1.88
HMGA2P52926 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGA2P52926 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGA2P52926 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HMGA2P52926 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HMGA2P52926 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGA2P52926 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGA2P52926 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGA2P52926 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGA2P52926 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGA2P52926 AC110491.1-201ENST00000562191 2010 ntBASIC3.29□□□□□ -1.88
HMGA2P52926 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGA2P52926 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGA2P52926 AL079305.1-201ENST00000623159 3008 ntBASIC3.29□□□□□ -1.88
HMGA2P52926 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGA2P52926 RNU1-75P-201ENST00000347264 129 ntBASIC3.29□□□□□ -1.88
HMGA2P52926 RNU6-626P-201ENST00000363354 107 ntBASIC3.29□□□□□ -1.88
HMGA2P52926 Y_RNA.369-201ENST00000365568 117 ntBASIC3.29□□□□□ -1.88
HMGA2P52926 AP002088.1-201ENST00000382740 395 ntBASIC3.29□□□□□ -1.88
HMGA2P52926 RNU6-514P-201ENST00000384208 107 ntBASIC3.29□□□□□ -1.88
HMGA2P52926 RNU6-1179P-201ENST00000384667 107 ntBASIC3.29□□□□□ -1.88
HMGA2P52926 RNU6-21P-201ENST00000384710 107 ntBASIC3.29□□□□□ -1.88
HMGA2P52926 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HMGA2P52926 AL592148.1-201ENST00000413568 445 ntBASIC3.29□□□□□ -1.88
HMGA2P52926 AC092447.6-201ENST00000414578 210 ntBASIC3.29□□□□□ -1.88
HMGA2P52926 AL390729.2-201ENST00000416137 156 ntBASIC3.29□□□□□ -1.88
HMGA2P52926 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGA2P52926 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGA2P52926 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGA2P52926 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGA2P52926 AC010683.1-201ENST00000473673 378 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms