Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MTND4P23-201ENST00000447723 1363 ntBASIC3.14□□□□□ -1.91
NEK3P51956 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NEK3P51956 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.14□□□□□ -1.91
NEK3P51956 RNU6-655P-201ENST00000362858 107 ntBASIC3.14□□□□□ -1.91
NEK3P51956 RNU6-1210P-201ENST00000363775 107 ntBASIC3.14□□□□□ -1.91
NEK3P51956 SNORD15B-201ENST00000384714 146 ntBASIC3.14□□□□□ -1.91
NEK3P51956 MIR218-1-201ENST00000384999 110 ntBASIC3.14□□□□□ -1.91
NEK3P51956 RNU6-220P-201ENST00000390919 107 ntBASIC3.14□□□□□ -1.91
NEK3P51956 RPL32P28-201ENST00000443577 397 ntBASIC3.14□□□□□ -1.91
NEK3P51956 MIR4801-201ENST00000582704 82 ntBASIC3.14□□□□□ -1.91
NEK3P51956 AP001836.1-201ENST00000604675 523 ntBASIC3.14□□□□□ -1.91
NEK3P51956 AC097372.5-201ENST00000623665 376 ntBASIC3.14□□□□□ -1.91
NEK3P51956 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NEK3P51956 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NEK3P51956 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.13□□□□□ -1.91
NEK3P51956 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NEK3P51956 RNU6-562P-201ENST00000362731 107 ntBASIC3.13□□□□□ -1.91
NEK3P51956 SNORA51.4-201ENST00000364993 124 ntBASIC3.13□□□□□ -1.91
NEK3P51956 RNU1-140P-201ENST00000365040 165 ntBASIC3.13□□□□□ -1.91
NEK3P51956 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.13□□□□□ -1.91
NEK3P51956 IFNA20P-201ENST00000436840 528 ntBASIC3.13□□□□□ -1.91
NEK3P51956 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.13□□□□□ -1.91
NEK3P51956 S100A11P2-201ENST00000467589 312 ntBASIC3.13□□□□□ -1.91
NEK3P51956 AC022447.4-201ENST00000504053 364 ntBASIC3.13□□□□□ -1.91
NEK3P51956 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
NEK3P51956 AC008885.1-201ENST00000514930 301 ntBASIC3.13□□□□□ -1.91
NEK3P51956 RNU2-53P-201ENST00000516257 147 ntBASIC3.13□□□□□ -1.91
NEK3P51956 AC009812.2-201ENST00000517657 457 ntBASIC3.13□□□□□ -1.91
NEK3P51956 HPRT1P3-201ENST00000539521 576 ntBASIC3.13□□□□□ -1.91
NEK3P51956 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.13□□□□□ -1.91
NEK3P51956 MIR3672-201ENST00000584290 82 ntBASIC3.13□□□□□ -1.91
NEK3P51956 MIR5739-201ENST00000619803 80 ntBASIC3.13□□□□□ -1.91
NEK3P51956 AC009248.2-201ENST00000619826 254 ntBASIC3.13□□□□□ -1.91
NEK3P51956 DUXAP9-208ENST00000622815 614 ntBASIC3.13□□□□□ -1.91
NEK3P51956 AC099654.14-201ENST00000638599 341 ntBASIC3.13□□□□□ -1.91
NEK3P51956 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NEK3P51956 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.12□□□□□ -1.91
NEK3P51956 RPL9P7-201ENST00000330965 580 ntBASIC3.12□□□□□ -1.91
NEK3P51956 RNA5SP240-201ENST00000365355 128 ntBASIC3.12□□□□□ -1.91
NEK3P51956 RNU6-831P-201ENST00000384548 107 ntBASIC3.12□□□□□ -1.91
NEK3P51956 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NEK3P51956 AL360182.1-201ENST00000397433 468 ntBASIC3.12□□□□□ -1.91
NEK3P51956 CBX3P9-201ENST00000402326 552 ntBASIC3.12□□□□□ -1.91
NEK3P51956 RN7SKP61-201ENST00000410642 295 ntBASIC3.12□□□□□ -1.91
NEK3P51956 RNU6-1148P-201ENST00000410992 104 ntBASIC3.12□□□□□ -1.91
NEK3P51956 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.12□□□□□ -1.91
NEK3P51956 MTND1P23-201ENST00000416931 372 ntBASIC3.12□□□□□ -1.91
NEK3P51956 RPL35AP12-201ENST00000425362 338 ntBASIC3.12□□□□□ -1.91
NEK3P51956 RPL23AP95-201ENST00000426806 265 ntBASIC3.12□□□□□ -1.91
NEK3P51956 AC078809.1-201ENST00000427601 140 ntBASIC3.12□□□□□ -1.91
NEK3P51956 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.12□□□□□ -1.91
NEK3P51956 CYP2C59P-201ENST00000457790 269 ntBASIC3.12□□□□□ -1.91
NEK3P51956 RPL9P9-202ENST00000466501 579 ntBASIC3.12□□□□□ -1.91
NEK3P51956 RPL30P1-201ENST00000488676 339 ntBASIC3.12□□□□□ -1.91
NEK3P51956 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.12□□□□□ -1.91
NEK3P51956 AC008526.1-201ENST00000509149 338 ntBASIC3.12□□□□□ -1.91
NEK3P51956 AC091826.1-201ENST00000514065 313 ntBASIC3.12□□□□□ -1.91
NEK3P51956 RPPH1-2P-201ENST00000516688 293 ntBASIC3.12□□□□□ -1.91
NEK3P51956 RN7SKP272-201ENST00000516988 232 ntBASIC3.12□□□□□ -1.91
NEK3P51956 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.12□□□□□ -1.91
NEK3P51956 AC104576.1-201ENST00000524225 88 ntBASIC3.12□□□□□ -1.91
NEK3P51956 TRAV32-201ENST00000553993 340 ntBASIC3.12□□□□□ -1.91
NEK3P51956 MIR5571-201ENST00000577998 113 ntBASIC3.12□□□□□ -1.91
NEK3P51956 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.12□□□□□ -1.91
NEK3P51956 AC135507.2-201ENST00000612443 309 ntBASIC3.12□□□□□ -1.91
NEK3P51956 AC135776.4-201ENST00000624300 1904 ntBASIC3.12□□□□□ -1.91
NEK3P51956 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
NEK3P51956 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NEK3P51956 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NEK3P51956 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NEK3P51956 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NEK3P51956 RNU6-212P-201ENST00000362642 104 ntBASIC3.11□□□□□ -1.91
NEK3P51956 RNU6-1285P-201ENST00000363480 105 ntBASIC3.11□□□□□ -1.91
NEK3P51956 SNORA71.1-201ENST00000364523 117 ntBASIC3.11□□□□□ -1.91
NEK3P51956 Y_RNA.279-201ENST00000364763 95 ntBASIC3.11□□□□□ -1.91
NEK3P51956 RNU6-1283P-201ENST00000365314 105 ntBASIC3.11□□□□□ -1.91
NEK3P51956 SNORD116-11-201ENST00000383882 92 ntBASIC3.11□□□□□ -1.91
NEK3P51956 SNORA32.2-201ENST00000384049 122 ntBASIC3.11□□□□□ -1.91
NEK3P51956 RNU6-692P-201ENST00000384496 107 ntBASIC3.11□□□□□ -1.91
NEK3P51956 MT-TL1-201ENST00000386347 75 ntBASIC3.11□□□□□ -1.91
NEK3P51956 UBA52P6-201ENST00000399822 382 ntBASIC3.11□□□□□ -1.91
NEK3P51956 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.11□□□□□ -1.91
NEK3P51956 RNU6-1140P-201ENST00000410517 106 ntBASIC3.11□□□□□ -1.91
NEK3P51956 AL030996.1-201ENST00000411430 235 ntBASIC3.11□□□□□ -1.91
NEK3P51956 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.11□□□□□ -1.91
NEK3P51956 AC104389.3-201ENST00000445629 235 ntBASIC3.11□□□□□ -1.91
NEK3P51956 RNU6-329P-201ENST00000459618 107 ntBASIC3.11□□□□□ -1.91
NEK3P51956 RPL30P12-201ENST00000474666 353 ntBASIC3.11□□□□□ -1.91
NEK3P51956 AL121594.1-201ENST00000475906 575 ntBASIC3.11□□□□□ -1.91
NEK3P51956 AP004217.1-201ENST00000480579 346 ntBASIC3.11□□□□□ -1.91
NEK3P51956 RN7SL20P-201ENST00000488827 297 ntBASIC3.11□□□□□ -1.91
NEK3P51956 MTCO2P30-201ENST00000503662 364 ntBASIC3.11□□□□□ -1.91
NEK3P51956 RNA5SP76-201ENST00000516277 87 ntBASIC3.11□□□□□ -1.91
NEK3P51956 AC118273.2-201ENST00000532092 465 ntBASIC3.11□□□□□ -1.91
NEK3P51956 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.11□□□□□ -1.91
NEK3P51956 AC023824.2-201ENST00000566185 400 ntBASIC3.11□□□□□ -1.91
NEK3P51956 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.11□□□□□ -1.91
NEK3P51956 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NEK3P51956 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
NEK3P51956 AC092268.1-201ENST00000342691 405 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms