Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
MRE11P49959 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
MRE11P49959 RNU6-174P-201ENST00000410406 106 ntBASIC3.85□□□□□ -1.79
MRE11P49959 BMS1P22-201ENST00000414726 313 ntBASIC3.85□□□□□ -1.79
MRE11P49959 CBX3P6-201ENST00000430257 527 ntBASIC3.85□□□□□ -1.79
MRE11P49959 SNORD105B-201ENST00000458770 79 ntBASIC3.85□□□□□ -1.79
MRE11P49959 RPS23P3-201ENST00000470993 430 ntBASIC3.85□□□□□ -1.79
MRE11P49959 RPL7P5-201ENST00000471472 736 ntBASIC3.85□□□□□ -1.79
MRE11P49959 RNU6-143P-201ENST00000516942 93 ntBASIC3.85□□□□□ -1.79
MRE11P49959 AL161798.1-201ENST00000604630 131 ntBASIC3.85□□□□□ -1.79
MRE11P49959 AL591516.1-201ENST00000611326 274 ntBASIC3.85□□□□□ -1.79
MRE11P49959 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.85□□□□□ -1.79
MRE11P49959 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
MRE11P49959 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
MRE11P49959 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
MRE11P49959 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
MRE11P49959 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.85□□□□□ -1.79
MRE11P49959 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
MRE11P49959 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
MRE11P49959 AC093908.1-201ENST00000623125 8092 ntBASIC3.84□□□□□ -1.79
MRE11P49959 DEFB108F-201ENST00000344638 222 ntBASIC3.84□□□□□ -1.79
MRE11P49959 Y_RNA.39-201ENST00000362620 98 ntBASIC3.84□□□□□ -1.79
MRE11P49959 RNU6-238P-201ENST00000363313 106 ntBASIC3.84□□□□□ -1.79
MRE11P49959 MIR301A-201ENST00000385261 86 ntBASIC3.84□□□□□ -1.79
MRE11P49959 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
MRE11P49959 RNU6-823P-201ENST00000391042 103 ntBASIC3.84□□□□□ -1.79
MRE11P49959 RNU6-101P-201ENST00000410323 104 ntBASIC3.84□□□□□ -1.79
MRE11P49959 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.84□□□□□ -1.79
MRE11P49959 BX276092.3-201ENST00000424182 230 ntBASIC3.84□□□□□ -1.79
MRE11P49959 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.84□□□□□ -1.79
MRE11P49959 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.84□□□□□ -1.79
MRE11P49959 DAP3P1-201ENST00000441522 278 ntBASIC3.84□□□□□ -1.79
MRE11P49959 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.84□□□□□ -1.79
MRE11P49959 AL353752.1-201ENST00000454946 260 ntBASIC3.84□□□□□ -1.79
MRE11P49959 AC112492.4-201ENST00000456549 352 ntBASIC3.84□□□□□ -1.79
MRE11P49959 UBL5P3-201ENST00000475112 231 ntBASIC3.84□□□□□ -1.79
MRE11P49959 AC010655.3-201ENST00000478818 450 ntBASIC3.84□□□□□ -1.79
MRE11P49959 AC113155.1-201ENST00000511141 769 ntBASIC3.84□□□□□ -1.79
MRE11P49959 MIR892C-201ENST00000516410 77 ntBASIC3.84□□□□□ -1.79
MRE11P49959 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.84□□□□□ -1.79
MRE11P49959 MIR4524B-201ENST00000581569 115 ntBASIC3.84□□□□□ -1.79
MRE11P49959 AC123912.5-201ENST00000605470 343 ntBASIC3.84□□□□□ -1.79
MRE11P49959 MIR7843-201ENST00000622274 79 ntBASIC3.84□□□□□ -1.79
MRE11P49959 AC007792.1-201ENST00000623023 402 ntBASIC3.84□□□□□ -1.79
MRE11P49959 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.83□□□□□ -1.8
MRE11P49959 Y_RNA.33-201ENST00000362591 102 ntBASIC3.83□□□□□ -1.8
MRE11P49959 Y_RNA.188-201ENST00000363952 111 ntBASIC3.83□□□□□ -1.8
MRE11P49959 Y_RNA.238-201ENST00000364441 102 ntBASIC3.83□□□□□ -1.8
MRE11P49959 RNU6-395P-201ENST00000365662 106 ntBASIC3.83□□□□□ -1.8
MRE11P49959 RNU6-790P-201ENST00000384479 105 ntBASIC3.83□□□□□ -1.8
MRE11P49959 RNA5SP344-201ENST00000411081 104 ntBASIC3.83□□□□□ -1.8
MRE11P49959 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.83□□□□□ -1.8
MRE11P49959 RPL23AP31-201ENST00000456160 467 ntBASIC3.83□□□□□ -1.8
MRE11P49959 AC011005.2-201ENST00000487324 359 ntBASIC3.83□□□□□ -1.8
MRE11P49959 RPL17P19-201ENST00000489069 552 ntBASIC3.83□□□□□ -1.8
MRE11P49959 AC022447.4-201ENST00000504053 364 ntBASIC3.83□□□□□ -1.8
MRE11P49959 MRPS35P2-201ENST00000508242 191 ntBASIC3.83□□□□□ -1.8
MRE11P49959 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.83□□□□□ -1.8
MRE11P49959 AC084851.1-201ENST00000529105 249 ntBASIC3.83□□□□□ -1.8
MRE11P49959 TRAV32-201ENST00000553993 340 ntBASIC3.83□□□□□ -1.8
MRE11P49959 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.83□□□□□ -1.8
MRE11P49959 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.83□□□□□ -1.8
MRE11P49959 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.83□□□□□ -1.8
MRE11P49959 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.83□□□□□ -1.8
MRE11P49959 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.83□□□□□ -1.8
MRE11P49959 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.83□□□□□ -1.8
MRE11P49959 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
MRE11P49959 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
MRE11P49959 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MRE11P49959 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.83□□□□□ -1.8
MRE11P49959 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MRE11P49959 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MRE11P49959 MTND5P7-201ENST00000413558 1798 ntBASIC3.82□□□□□ -1.8
MRE11P49959 SNORA54-201ENST00000384281 123 ntBASIC3.82□□□□□ -1.8
MRE11P49959 RNU6-1222P-201ENST00000384615 107 ntBASIC3.82□□□□□ -1.8
MRE11P49959 RNU6-325P-201ENST00000411132 105 ntBASIC3.82□□□□□ -1.8
MRE11P49959 NUP35P1-201ENST00000422734 947 ntBASIC3.82□□□□□ -1.8
MRE11P49959 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.82□□□□□ -1.8
MRE11P49959 CST9LP2-201ENST00000437612 320 ntBASIC3.82□□□□□ -1.8
MRE11P49959 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.82□□□□□ -1.8
MRE11P49959 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.82□□□□□ -1.8
MRE11P49959 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.82□□□□□ -1.8
MRE11P49959 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.82□□□□□ -1.8
MRE11P49959 AC105758.1-201ENST00000506038 399 ntBASIC3.82□□□□□ -1.8
MRE11P49959 MTND4LP22-201ENST00000508209 276 ntBASIC3.82□□□□□ -1.8
MRE11P49959 SCARNA15.2-201ENST00000516409 127 ntBASIC3.82□□□□□ -1.8
MRE11P49959 AC009812.2-201ENST00000517657 457 ntBASIC3.82□□□□□ -1.8
MRE11P49959 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MRE11P49959 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.82□□□□□ -1.8
MRE11P49959 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.82□□□□□ -1.8
MRE11P49959 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.82□□□□□ -1.8
MRE11P49959 AL360181.4-201ENST00000621752 134 ntBASIC3.82□□□□□ -1.8
MRE11P49959 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MRE11P49959 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MRE11P49959 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
MRE11P49959 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
MRE11P49959 RNU6-99P-201ENST00000364721 107 ntBASIC3.81□□□□□ -1.8
MRE11P49959 Y_RNA.314-201ENST00000365114 102 ntBASIC3.81□□□□□ -1.8
MRE11P49959 RNU6-1109P-201ENST00000391187 107 ntBASIC3.81□□□□□ -1.8
MRE11P49959 Z85995.1-201ENST00000415547 335 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms