Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC109479.2-201ENST00000517842 174 ntBASIC2.78□□□□□ -1.96
MMP2P08253 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.78□□□□□ -1.96
MMP2P08253 EIF4BP1-201ENST00000554881 351 ntBASIC2.78□□□□□ -1.96
MMP2P08253 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.78□□□□□ -1.96
MMP2P08253 AC007151.1-201ENST00000572774 483 ntBASIC2.78□□□□□ -1.96
MMP2P08253 MIR3605-201ENST00000583214 100 ntBASIC2.78□□□□□ -1.96
MMP2P08253 AC023043.2-201ENST00000589678 1026 ntBASIC2.78□□□□□ -1.96
MMP2P08253 AC078899.3-201ENST00000599065 212 ntBASIC2.78□□□□□ -1.96
MMP2P08253 AC091152.3-201ENST00000604227 325 ntBASIC2.78□□□□□ -1.96
MMP2P08253 ELOCP5-201ENST00000604924 333 ntBASIC2.78□□□□□ -1.96
MMP2P08253 AL121917.1-203ENST00000605534 577 ntBASIC2.78□□□□□ -1.96
MMP2P08253 AC107871.2-201ENST00000612894 502 ntBASIC2.78□□□□□ -1.96
MMP2P08253 AC063943.3-201ENST00000615562 356 ntBASIC2.78□□□□□ -1.96
MMP2P08253 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
MMP2P08253 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.78□□□□□ -1.96
MMP2P08253 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
MMP2P08253 RNU6-562P-201ENST00000362731 107 ntBASIC2.77□□□□□ -1.97
MMP2P08253 RNU6-827P-201ENST00000365553 106 ntBASIC2.77□□□□□ -1.97
MMP2P08253 SNORD116-11-201ENST00000383882 92 ntBASIC2.77□□□□□ -1.97
MMP2P08253 SNORD116-20-201ENST00000384529 92 ntBASIC2.77□□□□□ -1.97
MMP2P08253 RNU6-19P-201ENST00000384718 107 ntBASIC2.77□□□□□ -1.97
MMP2P08253 RNU6-1009P-201ENST00000390996 107 ntBASIC2.77□□□□□ -1.97
MMP2P08253 PTGES3P4-201ENST00000426243 356 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AC092427.1-202ENST00000430569 476 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AC087499.2-201ENST00000432861 149 ntBASIC2.77□□□□□ -1.97
MMP2P08253 RPS15AP7-201ENST00000439294 405 ntBASIC2.77□□□□□ -1.97
MMP2P08253 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.77□□□□□ -1.97
MMP2P08253 MRPL50P4-201ENST00000446432 475 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AC006026.2-201ENST00000457376 180 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AC103975.1-201ENST00000482506 483 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AC097462.2-201ENST00000504623 481 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AC008526.1-201ENST00000509149 338 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.77□□□□□ -1.97
MMP2P08253 RNA5SP385-201ENST00000515947 110 ntBASIC2.77□□□□□ -1.97
MMP2P08253 SNORA9.3-201ENST00000516383 129 ntBASIC2.77□□□□□ -1.97
MMP2P08253 Y_RNA.682-201ENST00000516457 100 ntBASIC2.77□□□□□ -1.97
MMP2P08253 RNA5SP367-201ENST00000516557 118 ntBASIC2.77□□□□□ -1.97
MMP2P08253 RNU6-566P-201ENST00000516790 107 ntBASIC2.77□□□□□ -1.97
MMP2P08253 RN7SKP40-201ENST00000517211 242 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AP000889.1-201ENST00000530968 660 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AC009163.5-201ENST00000575421 637 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AC103810.1-201ENST00000579873 453 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AC100830.2-201ENST00000581636 240 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AC091135.1-201ENST00000585943 307 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AL022345.1-201ENST00000607292 135 ntBASIC2.77□□□□□ -1.97
MMP2P08253 AC064836.2-201ENST00000609491 462 ntBASIC2.77□□□□□ -1.97
MMP2P08253 Y_RNA.804-201ENST00000615262 101 ntBASIC2.77□□□□□ -1.97
MMP2P08253 uc_338.15-201ENST00000615470 191 ntBASIC2.77□□□□□ -1.97
MMP2P08253 U4.7-201ENST00000638126 106 ntBASIC2.77□□□□□ -1.97
MMP2P08253 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MMP2P08253 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.77□□□□□ -1.97
MMP2P08253 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
MMP2P08253 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.76□□□□□ -1.97
MMP2P08253 RNU6-428P-201ENST00000362942 107 ntBASIC2.76□□□□□ -1.97
MMP2P08253 RNU6-527P-201ENST00000363425 104 ntBASIC2.76□□□□□ -1.97
MMP2P08253 Y_RNA.142-201ENST00000363491 102 ntBASIC2.76□□□□□ -1.97
MMP2P08253 Y_RNA.184-201ENST00000363884 108 ntBASIC2.76□□□□□ -1.97
MMP2P08253 SET-203ENST00000372688 801 ntTSL 2 BASIC2.76□□□□□ -1.97
MMP2P08253 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
MMP2P08253 BMS1P22-201ENST00000414726 313 ntBASIC2.76□□□□□ -1.97
MMP2P08253 SNRPEP8-201ENST00000442866 260 ntBASIC2.76□□□□□ -1.97
MMP2P08253 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.76□□□□□ -1.97
MMP2P08253 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.76□□□□□ -1.97
MMP2P08253 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.76□□□□□ -1.97
MMP2P08253 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.76□□□□□ -1.97
MMP2P08253 AC107626.1-201ENST00000471084 183 ntBASIC2.76□□□□□ -1.97
MMP2P08253 RPL23AP49-201ENST00000492925 468 ntBASIC2.76□□□□□ -1.97
MMP2P08253 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.76□□□□□ -1.97
MMP2P08253 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.76□□□□□ -1.97
MMP2P08253 SCARNA11.3-201ENST00000517276 130 ntBASIC2.76□□□□□ -1.97
MMP2P08253 CR383656.8-201ENST00000549046 145 ntBASIC2.76□□□□□ -1.97
MMP2P08253 AC103996.1-201ENST00000555468 102 ntBASIC2.76□□□□□ -1.97
MMP2P08253 AC138761.3-201ENST00000579993 334 ntBASIC2.76□□□□□ -1.97
MMP2P08253 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.76□□□□□ -1.97
MMP2P08253 AL670379.10-201ENST00000604330 253 ntBASIC2.76□□□□□ -1.97
MMP2P08253 AL670379.9-201ENST00000605428 253 ntBASIC2.76□□□□□ -1.97
MMP2P08253 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.76□□□□□ -1.97
MMP2P08253 uc_338.5-201ENST00000611839 155 ntBASIC2.76□□□□□ -1.97
MMP2P08253 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
MMP2P08253 AC138627.2-201ENST00000624202 601 ntBASIC2.76□□□□□ -1.97
MMP2P08253 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
MMP2P08253 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
MMP2P08253 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
MMP2P08253 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
MMP2P08253 Y_RNA.135-201ENST00000363439 95 ntBASIC2.75□□□□□ -1.97
MMP2P08253 SNORA80A-201ENST00000363922 136 ntBASIC2.75□□□□□ -1.97
MMP2P08253 RNU6-1106P-201ENST00000390845 107 ntBASIC2.75□□□□□ -1.97
MMP2P08253 AL356432.1-201ENST00000405809 419 ntBASIC2.75□□□□□ -1.97
MMP2P08253 RNA5SP21-201ENST00000410917 96 ntBASIC2.75□□□□□ -1.97
MMP2P08253 AL117339.3-201ENST00000418733 162 ntBASIC2.75□□□□□ -1.97
MMP2P08253 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.75□□□□□ -1.97
MMP2P08253 AL590632.1-201ENST00000424289 371 ntBASIC2.75□□□□□ -1.97
MMP2P08253 UBE2V1P4-201ENST00000425374 344 ntBASIC2.75□□□□□ -1.97
MMP2P08253 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.75□□□□□ -1.97
MMP2P08253 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.75□□□□□ -1.97
MMP2P08253 AC105272.1-201ENST00000438604 198 ntBASIC2.75□□□□□ -1.97
MMP2P08253 HMGB1P18-201ENST00000438801 619 ntBASIC2.75□□□□□ -1.97
MMP2P08253 AC009296.1-201ENST00000443146 155 ntBASIC2.75□□□□□ -1.97
MMP2P08253 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.75□□□□□ -1.97
MMP2P08253 AC012308.1-201ENST00000451232 178 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms