Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MIR4513-201ENST00000581077 86 ntBASIC2.57□□□□□ -2
BEST1O76090 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.57□□□□□ -2
BEST1O76090 VN1R107P-201ENST00000601784 209 ntBASIC2.57□□□□□ -2
BEST1O76090 AC123912.5-201ENST00000605470 343 ntBASIC2.57□□□□□ -2
BEST1O76090 AC046143.2-201ENST00000609789 160 ntBASIC2.57□□□□□ -2
BEST1O76090 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
BEST1O76090 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.57□□□□□ -2
BEST1O76090 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
BEST1O76090 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
BEST1O76090 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
BEST1O76090 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.56□□□□□ -2
BEST1O76090 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
BEST1O76090 RNU6-1210P-201ENST00000363775 107 ntBASIC2.56□□□□□ -2
BEST1O76090 RNU4-75P-201ENST00000364621 146 ntBASIC2.56□□□□□ -2
BEST1O76090 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
BEST1O76090 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.56□□□□□ -2
BEST1O76090 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.56□□□□□ -2
BEST1O76090 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.56□□□□□ -2
BEST1O76090 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.56□□□□□ -2
BEST1O76090 AL121601.2-201ENST00000438019 707 ntBASIC2.56□□□□□ -2
BEST1O76090 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.56□□□□□ -2
BEST1O76090 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.56□□□□□ -2
BEST1O76090 RPL39P29-201ENST00000447779 157 ntBASIC2.56□□□□□ -2
BEST1O76090 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.56□□□□□ -2
BEST1O76090 AL121594.1-201ENST00000475906 575 ntBASIC2.56□□□□□ -2
BEST1O76090 RPS27AP9-201ENST00000477681 438 ntBASIC2.56□□□□□ -2
BEST1O76090 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.56□□□□□ -2
BEST1O76090 CCDC34P1-201ENST00000507441 517 ntBASIC2.56□□□□□ -2
BEST1O76090 RNU6-826P-201ENST00000516827 104 ntBASIC2.56□□□□□ -2
BEST1O76090 RNU6-835P-201ENST00000516974 104 ntBASIC2.56□□□□□ -2
BEST1O76090 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.56□□□□□ -2
BEST1O76090 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
BEST1O76090 AL159153.1-201ENST00000619688 317 ntBASIC2.56□□□□□ -2
BEST1O76090 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
BEST1O76090 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.56□□□□□ -2
BEST1O76090 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.56□□□□□ -2
BEST1O76090 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
BEST1O76090 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
BEST1O76090 RNU6-212P-201ENST00000362642 104 ntBASIC2.55□□□□□ -2
BEST1O76090 RNA5SP126-201ENST00000365092 109 ntBASIC2.55□□□□□ -2
BEST1O76090 Y_RNA.318-201ENST00000365131 97 ntBASIC2.55□□□□□ -2
BEST1O76090 RNU6-1222P-201ENST00000384615 107 ntBASIC2.55□□□□□ -2
BEST1O76090 MIR561-201ENST00000385216 97 ntBASIC2.55□□□□□ -2
BEST1O76090 CBX3P9-201ENST00000402326 552 ntBASIC2.55□□□□□ -2
BEST1O76090 AL162578.1-201ENST00000406202 378 ntBASIC2.55□□□□□ -2
BEST1O76090 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.55□□□□□ -2
BEST1O76090 MTCO3P38-201ENST00000468910 766 ntBASIC2.55□□□□□ -2
BEST1O76090 RPL30P12-201ENST00000474666 353 ntBASIC2.55□□□□□ -2
BEST1O76090 AC019235.1-201ENST00000503847 207 ntBASIC2.55□□□□□ -2
BEST1O76090 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.55□□□□□ -2
BEST1O76090 SNORA48.11-201ENST00000517015 89 ntBASIC2.55□□□□□ -2
BEST1O76090 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.55□□□□□ -2
BEST1O76090 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
BEST1O76090 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.55□□□□□ -2
BEST1O76090 BNIP3P16-201ENST00000589779 534 ntBASIC2.55□□□□□ -2
BEST1O76090 AC099654.12-201ENST00000639868 649 ntBASIC2.55□□□□□ -2
BEST1O76090 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
BEST1O76090 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.54□□□□□ -2
BEST1O76090 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
BEST1O76090 SNORD114-30-201ENST00000364448 72 ntBASIC2.54□□□□□ -2
BEST1O76090 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.54□□□□□ -2
BEST1O76090 RNA5SP219-201ENST00000390940 113 ntBASIC2.54□□□□□ -2
BEST1O76090 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.54□□□□□ -2
BEST1O76090 RN7SKP158-201ENST00000410453 326 ntBASIC2.54□□□□□ -2
BEST1O76090 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.54□□□□□ -2
BEST1O76090 ARL5AP1-201ENST00000418991 388 ntBASIC2.54□□□□□ -2
BEST1O76090 AIMP1P2-201ENST00000425294 312 ntBASIC2.54□□□□□ -2
BEST1O76090 AL139109.1-201ENST00000455491 297 ntBASIC2.54□□□□□ -2
BEST1O76090 TPTE2P5-203ENST00000458118 728 ntBASIC2.54□□□□□ -2
BEST1O76090 AC008571.1-201ENST00000467232 300 ntBASIC2.54□□□□□ -2
BEST1O76090 RN7SL636P-201ENST00000497504 294 ntBASIC2.54□□□□□ -2
BEST1O76090 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.54□□□□□ -2
BEST1O76090 AC026436.1-201ENST00000510537 270 ntBASIC2.54□□□□□ -2
BEST1O76090 RNU6-586P-201ENST00000517265 104 ntBASIC2.54□□□□□ -2
BEST1O76090 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.54□□□□□ -2
BEST1O76090 CENPUP1-201ENST00000526649 1202 ntBASIC2.54□□□□□ -2
BEST1O76090 IMMP1LP2-201ENST00000552954 492 ntBASIC2.54□□□□□ -2
BEST1O76090 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.54□□□□□ -2
BEST1O76090 AL138976.2-201ENST00000563989 694 ntBASIC2.54□□□□□ -2
BEST1O76090 AC091135.1-201ENST00000585943 307 ntBASIC2.54□□□□□ -2
BEST1O76090 AC103810.6-201ENST00000606708 136 ntBASIC2.54□□□□□ -2
BEST1O76090 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
BEST1O76090 Y_RNA.40-201ENST00000362645 93 ntBASIC2.53□□□□□ -2
BEST1O76090 RNU6-38P-201ENST00000384085 107 ntBASIC2.53□□□□□ -2
BEST1O76090 MIR544A-201ENST00000384855 91 ntBASIC2.53□□□□□ -2
BEST1O76090 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BEST1O76090 RPS29P13-201ENST00000402041 169 ntBASIC2.53□□□□□ -2
BEST1O76090 RNU6-648P-201ENST00000410190 107 ntBASIC2.53□□□□□ -2
BEST1O76090 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.53□□□□□ -2
BEST1O76090 AL117339.3-201ENST00000418733 162 ntBASIC2.53□□□□□ -2
BEST1O76090 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.53□□□□□ -2
BEST1O76090 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BEST1O76090 RNU6-333P-201ENST00000459117 107 ntBASIC2.53□□□□□ -2
BEST1O76090 RPL30P1-201ENST00000488676 339 ntBASIC2.53□□□□□ -2
BEST1O76090 AC234781.5-201ENST00000508429 271 ntBASIC2.53□□□□□ -2
BEST1O76090 SNORA14.1-201ENST00000516113 141 ntBASIC2.53□□□□□ -2
BEST1O76090 RNU6-189P-201ENST00000516120 101 ntBASIC2.53□□□□□ -2
BEST1O76090 RNU6-506P-201ENST00000516553 94 ntBASIC2.53□□□□□ -2
BEST1O76090 AC115990.1-201ENST00000526957 301 ntBASIC2.53□□□□□ -2
BEST1O76090 AC027807.1-201ENST00000559921 996 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms