Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RN7SL283P-201ENST00000489055 303 ntBASIC3.41□□□□□ -1.86
CTNND1O60716 RPL23AP49-201ENST00000492925 468 ntBASIC3.41□□□□□ -1.86
CTNND1O60716 GZMAP1-201ENST00000503054 631 ntBASIC3.41□□□□□ -1.86
CTNND1O60716 RNU5F-8P-201ENST00000515941 111 ntBASIC3.41□□□□□ -1.86
CTNND1O60716 RNU5B-3P-201ENST00000516601 115 ntBASIC3.41□□□□□ -1.86
CTNND1O60716 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNND1O60716 AC002064.3-201ENST00000623448 346 ntBASIC3.41□□□□□ -1.86
CTNND1O60716 AC099654.5-201ENST00000636479 350 ntBASIC3.41□□□□□ -1.86
CTNND1O60716 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CTNND1O60716 AC099654.7-201ENST00000635788 2127 ntBASIC3.41□□□□□ -1.86
CTNND1O60716 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.41□□□□□ -1.86
CTNND1O60716 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CTNND1O60716 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CTNND1O60716 HAUS6P2-201ENST00000433254 2404 ntBASIC3.4□□□□□ -1.86
CTNND1O60716 U3.6-201ENST00000363622 211 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 RNU6-105P-201ENST00000363909 104 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 Y_RNA.339-201ENST00000365325 102 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CTNND1O60716 RPS29P13-201ENST00000402041 169 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
CTNND1O60716 RNA5SP274-201ENST00000410484 108 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.4□□□□□ -1.87
CTNND1O60716 AL590632.1-201ENST00000424289 371 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.4□□□□□ -1.87
CTNND1O60716 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.4□□□□□ -1.87
CTNND1O60716 AC133134.1-201ENST00000466800 359 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.4□□□□□ -1.87
CTNND1O60716 MTND5P5-201ENST00000503764 376 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 RPL39P5-202ENST00000512505 151 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 AC105029.1-201ENST00000520250 669 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 AP005639.2-201ENST00000527592 928 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.4□□□□□ -1.87
CTNND1O60716 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.4□□□□□ -1.87
CTNND1O60716 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.4□□□□□ -1.87
CTNND1O60716 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.4□□□□□ -1.87
CTNND1O60716 VN1R107P-201ENST00000601784 209 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.4□□□□□ -1.87
CTNND1O60716 AC244517.12-201ENST00000623581 663 ntBASIC3.4□□□□□ -1.87
CTNND1O60716 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CTNND1O60716 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CTNND1O60716 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CTNND1O60716 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTNND1O60716 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CTNND1O60716 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTNND1O60716 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTNND1O60716 RNU6-336P-201ENST00000364891 107 ntBASIC3.39□□□□□ -1.87
CTNND1O60716 MIR147B-201ENST00000390185 80 ntBASIC3.39□□□□□ -1.87
CTNND1O60716 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.39□□□□□ -1.87
CTNND1O60716 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.39□□□□□ -1.87
CTNND1O60716 AC124916.1-201ENST00000444020 547 ntBASIC3.39□□□□□ -1.87
CTNND1O60716 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.39□□□□□ -1.87
CTNND1O60716 AC107399.1-201ENST00000451226 265 ntBASIC3.39□□□□□ -1.87
CTNND1O60716 RPS29P12-201ENST00000460178 152 ntBASIC3.39□□□□□ -1.87
CTNND1O60716 RPS27P27-201ENST00000498779 255 ntBASIC3.39□□□□□ -1.87
CTNND1O60716 FGF7P4-201ENST00000509595 295 ntBASIC3.39□□□□□ -1.87
CTNND1O60716 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.39□□□□□ -1.87
CTNND1O60716 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.39□□□□□ -1.87
CTNND1O60716 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.39□□□□□ -1.87
CTNND1O60716 AC079600.2-201ENST00000550076 130 ntBASIC3.39□□□□□ -1.87
CTNND1O60716 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.39□□□□□ -1.87
CTNND1O60716 AC008739.2-201ENST00000597006 317 ntBASIC3.39□□□□□ -1.87
CTNND1O60716 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.39□□□□□ -1.87
CTNND1O60716 AC005046.1-201ENST00000608515 625 ntBASIC3.39□□□□□ -1.87
CTNND1O60716 AC138627.2-201ENST00000624202 601 ntBASIC3.39□□□□□ -1.87
CTNND1O60716 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CTNND1O60716 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.38□□□□□ -1.87
CTNND1O60716 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTNND1O60716 AC092435.3-201ENST00000565538 3654 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTNND1O60716 RPL9P7-201ENST00000330965 580 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 MIR548F5-201ENST00000408421 86 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 RNU2-41P-201ENST00000410991 178 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 AL030996.1-201ENST00000411430 235 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 AC004383.1-201ENST00000438135 289 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 AL513043.1-201ENST00000439124 535 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 RN7SL75P-201ENST00000461926 281 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 RPL9P9-202ENST00000466501 579 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 RPL31P41-201ENST00000477967 372 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.38□□□□□ -1.87
CTNND1O60716 SNORA31.23-201ENST00000517219 133 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 TRAV32-201ENST00000553993 340 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 RPS3AP23-202ENST00000574601 686 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 FGF7P1-201ENST00000582820 288 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.38□□□□□ -1.87
CTNND1O60716 RNU6-91P-201ENST00000607774 107 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.38□□□□□ -1.87
CTNND1O60716 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.38□□□□□ -1.87
CTNND1O60716 AC090617.7-201ENST00000623952 126 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTNND1O60716 AC093831.2-201ENST00000624393 3427 ntBASIC3.38□□□□□ -1.87
CTNND1O60716 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.37□□□□□ -1.87
CTNND1O60716 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CTNND1O60716 AC008264.2-201ENST00000610193 3731 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 AP003122.5-201ENST00000527668 3766 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 SNORD62.1-201ENST00000362541 86 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 SNORD56.1-201ENST00000362913 68 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 RNU6-487P-201ENST00000365430 104 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 Y_RNA.356-201ENST00000365475 113 ntBASIC3.37□□□□□ -1.87
CTNND1O60716 MT-TD-201ENST00000387419 68 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms