Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 PDCD5P2-201ENST00000507570 312 ntBASIC4.94□□□□□ -1.62
HOXA2O43364 RNU2-58P-201ENST00000516403 183 ntBASIC4.94□□□□□ -1.62
HOXA2O43364 RNU6-659P-201ENST00000516454 104 ntBASIC4.94□□□□□ -1.62
HOXA2O43364 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXA2O43364 AC027176.1-201ENST00000560204 514 ntBASIC4.94□□□□□ -1.62
HOXA2O43364 MIR3923-201ENST00000579521 83 ntBASIC4.94□□□□□ -1.62
HOXA2O43364 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXA2O43364 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HOXA2O43364 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HOXA2O43364 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA2O43364 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
HOXA2O43364 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA2O43364 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA2O43364 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA2O43364 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA2O43364 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA2O43364 SNORD115-30-201ENST00000364117 82 ntBASIC4.93□□□□□ -1.62
HOXA2O43364 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA2O43364 YPEL5P1-201ENST00000419731 367 ntBASIC4.93□□□□□ -1.62
HOXA2O43364 RPS12P10-201ENST00000427031 377 ntBASIC4.93□□□□□ -1.62
HOXA2O43364 AL591419.1-201ENST00000427423 339 ntBASIC4.93□□□□□ -1.62
HOXA2O43364 RNU7-197P-201ENST00000458836 62 ntBASIC4.93□□□□□ -1.62
HOXA2O43364 RN7SL98P-201ENST00000462271 300 ntBASIC4.93□□□□□ -1.62
HOXA2O43364 AIG1P1-201ENST00000503376 148 ntBASIC4.93□□□□□ -1.62
HOXA2O43364 RN7SKP179-201ENST00000516126 217 ntBASIC4.93□□□□□ -1.62
HOXA2O43364 AC021739.1-201ENST00000559631 174 ntBASIC4.93□□□□□ -1.62
HOXA2O43364 CYCSP40-201ENST00000575927 294 ntBASIC4.93□□□□□ -1.62
HOXA2O43364 AL391813.1-201ENST00000603098 260 ntBASIC4.93□□□□□ -1.62
HOXA2O43364 SNORD11B-201ENST00000607707 90 ntBASIC4.93□□□□□ -1.62
HOXA2O43364 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA2O43364 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA2O43364 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA2O43364 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA2O43364 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA2O43364 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HOXA2O43364 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA2O43364 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA2O43364 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA2O43364 MAPK10-320ENST00000641462 6696 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
HOXA2O43364 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
HOXA2O43364 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXA2O43364 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXA2O43364 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA2O43364 RNU6-969P-201ENST00000383900 105 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 RNU6-643P-201ENST00000384018 107 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 SNORA5.1-201ENST00000384275 131 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 SNORA70C-201ENST00000384538 135 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 Y_RNA.563-201ENST00000384707 108 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 MIR195-201ENST00000385194 87 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 MIR526A2-201ENST00000390198 65 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 MIR1193-201ENST00000408109 78 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 SNORA11-201ENST00000408789 128 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXA2O43364 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXA2O43364 RNU6-453P-201ENST00000516819 85 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXA2O43364 MIR3160-1-201ENST00000577972 85 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 MIR3646-201ENST00000578301 84 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 AC114781.5-201ENST00000615297 108 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXA2O43364 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXA2O43364 AL391516.1-201ENST00000554380 2449 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HOXA2O43364 USP8P1-201ENST00000494673 3183 ntBASIC4.92□□□□□ -1.62
HOXA2O43364 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA2O43364 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA2O43364 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA2O43364 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA2O43364 RNU6-407P-201ENST00000365280 104 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 MIR659-201ENST00000384963 97 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 PTMAP5-201ENST00000393073 333 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 CBX3P9-201ENST00000402326 552 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 RNU6-1064P-201ENST00000410626 104 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA2O43364 CYCSP48-201ENST00000417124 323 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 EIF4HP2-201ENST00000424380 563 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 PHBP16-201ENST00000446318 950 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 EEF1B2P7-201ENST00000451177 676 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA2O43364 AC245047.8-201ENST00000456455 284 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 RPS29P20-201ENST00000489592 171 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA2O43364 SCARNA8-201ENST00000515924 131 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 RNA5SP249-201ENST00000516127 99 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 MIR2116-201ENST00000517221 80 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 MIR5688-201ENST00000580619 83 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 MIR3138-201ENST00000585238 82 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA2O43364 AC015914.2-201ENST00000618167 288 ntBASIC4.91□□□□□ -1.62
HOXA2O43364 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HOXA2O43364 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA2O43364 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA2O43364 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA2O43364 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HOXA2O43364 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HOXA2O43364 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.9□□□□□ -1.62
HOXA2O43364 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
HOXA2O43364 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
HOXA2O43364 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms