Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 Y_RNA.244-201ENST00000364484 109 ntBASIC4.59□□□□□ -1.67
H3BM21 RNU6-1296P-201ENST00000383879 107 ntBASIC4.59□□□□□ -1.67
H3BM21 SNORD12C-201ENST00000386307 89 ntBASIC4.59□□□□□ -1.67
H3BM21 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.59□□□□□ -1.67
H3BM21 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
H3BM21 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.59□□□□□ -1.67
H3BM21 Y_RNA.690-201ENST00000516603 95 ntBASIC4.59□□□□□ -1.67
H3BM21 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.59□□□□□ -1.67
H3BM21 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.59□□□□□ -1.67
H3BM21 AC125257.1-201ENST00000560400 2930 ntBASIC4.59□□□□□ -1.67
H3BM21 MIR4724-201ENST00000579485 89 ntBASIC4.59□□□□□ -1.67
H3BM21 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
H3BM21 RPL30P11-203ENST00000598995 310 ntBASIC4.59□□□□□ -1.67
H3BM21 VN1R85P-201ENST00000601587 426 ntBASIC4.59□□□□□ -1.67
H3BM21 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.59□□□□□ -1.67
H3BM21 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.59□□□□□ -1.67
H3BM21 SCARNA4-202ENST00000625402 129 ntBASIC4.59□□□□□ -1.67
H3BM21 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.59□□□□□ -1.67
H3BM21 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.59□□□□□ -1.67
H3BM21 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.59□□□□□ -1.68
H3BM21 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
H3BM21 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
H3BM21 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
H3BM21 ASNSP1-201ENST00000518311 1939 ntBASIC4.58□□□□□ -1.68
H3BM21 SCN1A-220ENST00000641603 12506 ntBASIC4.58□□□□□ -1.68
H3BM21 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.58□□□□□ -1.68
H3BM21 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
H3BM21 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
H3BM21 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
H3BM21 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
H3BM21 MIR367-201ENST00000362299 68 ntBASIC4.58□□□□□ -1.68
H3BM21 RNU6-72P-201ENST00000384285 79 ntBASIC4.58□□□□□ -1.68
H3BM21 RNU6-882P-201ENST00000391025 103 ntBASIC4.58□□□□□ -1.68
H3BM21 NDUFS5P4-201ENST00000412983 318 ntBASIC4.58□□□□□ -1.68
H3BM21 AC243964.1-201ENST00000441814 261 ntBASIC4.58□□□□□ -1.68
H3BM21 AC011276.1-201ENST00000469688 323 ntBASIC4.58□□□□□ -1.68
H3BM21 UBE2CP3-201ENST00000502715 450 ntBASIC4.58□□□□□ -1.68
H3BM21 RNA5SP54-201ENST00000516951 92 ntBASIC4.58□□□□□ -1.68
H3BM21 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.58□□□□□ -1.68
H3BM21 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.58□□□□□ -1.68
H3BM21 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.58□□□□□ -1.68
H3BM21 AC139713.2-215ENST00000641428 5037 ntBASIC4.58□□□□□ -1.68
H3BM21 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
H3BM21 AL672167.1-203ENST00000641299 2975 ntBASIC4.58□□□□□ -1.68
H3BM21 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.58□□□□□ -1.68
H3BM21 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
H3BM21 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
H3BM21 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H3BM21 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
H3BM21 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.57□□□□□ -1.68
H3BM21 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H3BM21 SNORD32A-201ENST00000364805 84 ntBASIC4.57□□□□□ -1.68
H3BM21 AL603914.1-201ENST00000401964 204 ntBASIC4.57□□□□□ -1.68
H3BM21 MIR1255A-201ENST00000408338 113 ntBASIC4.57□□□□□ -1.68
H3BM21 CYCSP10-201ENST00000417973 294 ntBASIC4.57□□□□□ -1.68
H3BM21 RPL17P36-201ENST00000420302 549 ntBASIC4.57□□□□□ -1.68
H3BM21 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.57□□□□□ -1.68
H3BM21 RPEP3-201ENST00000425462 676 ntBASIC4.57□□□□□ -1.68
H3BM21 FTH1P6-201ENST00000430768 320 ntBASIC4.57□□□□□ -1.68
H3BM21 AL078601.1-201ENST00000444542 271 ntBASIC4.57□□□□□ -1.68
H3BM21 AC010469.1-201ENST00000463864 576 ntBASIC4.57□□□□□ -1.68
H3BM21 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.57□□□□□ -1.68
H3BM21 RN7SKP46-201ENST00000515942 234 ntBASIC4.57□□□□□ -1.68
H3BM21 AC025647.1-201ENST00000517879 253 ntBASIC4.57□□□□□ -1.68
H3BM21 ATP5J2P6-201ENST00000565203 266 ntBASIC4.57□□□□□ -1.68
H3BM21 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
H3BM21 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H3BM21 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
H3BM21 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H3BM21 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.57□□□□□ -1.68
H3BM21 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.56□□□□□ -1.68
H3BM21 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3BM21 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.56□□□□□ -1.68
H3BM21 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.56□□□□□ -1.68
H3BM21 SNORD45.3-201ENST00000363836 72 ntBASIC4.56□□□□□ -1.68
H3BM21 RNA5SP125-201ENST00000364843 120 ntBASIC4.56□□□□□ -1.68
H3BM21 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3BM21 RNU6-793P-201ENST00000384233 104 ntBASIC4.56□□□□□ -1.68
H3BM21 SNORA72-201ENST00000384339 132 ntBASIC4.56□□□□□ -1.68
H3BM21 RNU6-1113P-201ENST00000384348 107 ntBASIC4.56□□□□□ -1.68
H3BM21 RNU6-136P-201ENST00000384663 107 ntBASIC4.56□□□□□ -1.68
H3BM21 SDHCP2-201ENST00000398565 501 ntBASIC4.56□□□□□ -1.68
H3BM21 RPL23AP95-201ENST00000426806 265 ntBASIC4.56□□□□□ -1.68
H3BM21 AC011998.1-201ENST00000433403 117 ntBASIC4.56□□□□□ -1.68
H3BM21 RNA5SP281-201ENST00000516504 135 ntBASIC4.56□□□□□ -1.68
H3BM21 RNU6-572P-201ENST00000516724 80 ntBASIC4.56□□□□□ -1.68
H3BM21 AC093331.1-201ENST00000521474 169 ntBASIC4.56□□□□□ -1.68
H3BM21 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.56□□□□□ -1.68
H3BM21 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.56□□□□□ -1.68
H3BM21 AC007012.1-201ENST00000567192 175 ntBASIC4.56□□□□□ -1.68
H3BM21 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.56□□□□□ -1.68
H3BM21 MIR5571-201ENST00000577998 113 ntBASIC4.56□□□□□ -1.68
H3BM21 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.56□□□□□ -1.68
H3BM21 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
H3BM21 AC027309.3-201ENST00000623419 351 ntBASIC4.56□□□□□ -1.68
H3BM21 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
H3BM21 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3BM21 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3BM21 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.56□□□□□ -1.68
H3BM21 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms