Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 AC025281.1-201ENST00000567026 265 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 AC006504.6-201ENST00000590142 199 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 AP003122.5-201ENST00000527668 3766 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 AC009487.2-201ENST00000420969 6821 ntBASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CCDC85CA6NKD9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 MIR448-201ENST00000362131 111 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 RNY1P16-201ENST00000363063 111 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 SNORD32A-201ENST00000364805 84 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 RNU6-1032P-201ENST00000384100 107 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 RNU6-738P-201ENST00000384531 106 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 RNU6-1160P-201ENST00000384546 104 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 NUP35P1-201ENST00000422734 947 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 PTGES3P4-201ENST00000426243 356 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 RPL23AP50-201ENST00000434149 455 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 MTND4P19-201ENST00000446659 478 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AL031659.1-201ENST00000447075 539 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 RPL30P10-201ENST00000488148 337 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 RNU5F-8P-201ENST00000515941 111 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 RNU5B-3P-201ENST00000516601 115 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 RNU6-711P-201ENST00000517255 106 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AC023442.1-201ENST00000531247 422 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AC016256.1-201ENST00000547971 354 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AL391813.1-201ENST00000603098 260 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AL355802.3-201ENST00000607571 545 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AC097372.5-201ENST00000623665 376 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AC010889.1-201ENST00000566193 2666 ntBASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC85CA6NKD9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC85CA6NKD9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC85CA6NKD9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC85CA6NKD9 SNORD56.1-201ENST00000362913 68 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 SNORA63C-201ENST00000364578 129 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 Y_RNA.428-201ENST00000384078 102 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 RNU6-308P-201ENST00000390957 107 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 RNU2-49P-201ENST00000410666 184 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 AL603825.1-201ENST00000438481 80 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 AL031183.1-201ENST00000457667 207 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 AC010469.1-201ENST00000463864 576 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 RNU6-120P-201ENST00000516077 103 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 AC009812.2-201ENST00000517657 457 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 AC090897.2-201ENST00000581715 130 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 AC016925.2-201ENST00000605108 242 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 AC091564.4-201ENST00000533934 2194 ntBASIC3.9□□□□□ -1.79
CCDC85CA6NKD9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 RNU6-858P-201ENST00000362436 107 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 RNY1P14-201ENST00000384426 108 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 MIR606-201ENST00000384851 96 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 AL160275.2-201ENST00000412010 394 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 FCF1P8-201ENST00000510322 597 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 SNORD116.3-201ENST00000517176 78 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 MIR4319-201ENST00000577285 85 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 AC060766.3-201ENST00000591442 263 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 AC083806.3-201ENST00000614016 455 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 HMGB1P24-202ENST00000615653 685 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC85CA6NKD9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms