Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC018437.1-201ENST00000492214 406 ntBASIC2.98□□□□□ -1.93
TBC1D3FA6NER0 RPL23AP49-201ENST00000492925 468 ntBASIC2.98□□□□□ -1.93
TBC1D3FA6NER0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.98□□□□□ -1.93
TBC1D3FA6NER0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.98□□□□□ -1.93
TBC1D3FA6NER0 RNA5SP367-201ENST00000516557 118 ntBASIC2.98□□□□□ -1.93
TBC1D3FA6NER0 SNORA31.23-201ENST00000517219 133 ntBASIC2.98□□□□□ -1.93
TBC1D3FA6NER0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.98□□□□□ -1.93
TBC1D3FA6NER0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TBC1D3FA6NER0 CPDP1-201ENST00000579660 283 ntBASIC2.98□□□□□ -1.93
TBC1D3FA6NER0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.98□□□□□ -1.93
TBC1D3FA6NER0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.98□□□□□ -1.93
TBC1D3FA6NER0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
TBC1D3FA6NER0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 RPL9P7-201ENST00000330965 580 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 RNU4-79P-201ENST00000362764 141 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 Y_RNA.58-201ENST00000362807 102 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 Y_RNA.67-201ENST00000362870 100 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 RNU6-527P-201ENST00000363425 104 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 Y_RNA.154-201ENST00000363624 102 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 RNY3P1-201ENST00000365085 102 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 RNY3-201ENST00000365484 102 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 Y_RNA.387-201ENST00000383918 102 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 Y_RNA.490-201ENST00000384413 102 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 RNU6-843P-201ENST00000384454 104 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 ATG3P1-201ENST00000419507 911 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AC009969.1-201ENST00000438726 172 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AL513043.1-201ENST00000439124 535 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 RPL9P9-202ENST00000466501 579 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AP001025.1-201ENST00000486139 332 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AC116337.1-201ENST00000509680 687 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 PTP4A1P4-201ENST00000512479 322 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 Y_RNA.675-201ENST00000516389 149 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 HPRT1P3-201ENST00000539521 576 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AC107016.2-201ENST00000547968 190 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AL355877.2-201ENST00000603670 358 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AL133215.3-201ENST00000609801 448 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AL359314.1-201ENST00000616913 261 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 AC007318.2-201ENST00000620999 243 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 FAM35CP-201ENST00000554755 2470 ntBASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.97□□□□□ -1.93
TBC1D3FA6NER0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
TBC1D3FA6NER0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 SNORD56.1-201ENST00000362913 68 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 RNU6-1027P-201ENST00000383998 107 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 Y_RNA.482-201ENST00000384377 111 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 RNU6-851P-201ENST00000384565 107 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 MIR517A-201ENST00000385001 87 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 RNA5SP274-201ENST00000410484 108 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 RNU6-293P-201ENST00000411259 106 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 AL139132.1-201ENST00000431587 344 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 AL591043.1-201ENST00000432461 424 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 AC007969.2-201ENST00000441891 191 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 RPS12P18-201ENST00000442381 270 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 PCMTD1P1-201ENST00000455560 355 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 RN7SL20P-201ENST00000488827 297 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 GTF3AP2-201ENST00000557014 266 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 FRG2DP-202ENST00000566967 323 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 ELOCP29-201ENST00000588193 334 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 VN1R107P-201ENST00000601784 209 ntBASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TBC1D3FA6NER0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 RNA5SP139-201ENST00000364340 117 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 RNU6-601P-201ENST00000384540 107 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 RNU6-748P-201ENST00000384648 107 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 MIR1289-1-201ENST00000408836 144 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 AC245054.2-201ENST00000415639 319 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 AC243964.1-201ENST00000441814 261 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 AL135938.1-201ENST00000443141 297 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 Y_RNA.632-201ENST00000459189 102 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 AC133134.1-201ENST00000466800 359 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 AC026782.1-201ENST00000512952 449 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 RNU5F-8P-201ENST00000515941 111 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 RNU6-559P-201ENST00000516151 98 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 RNU6-1016P-201ENST00000516689 94 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 SNORA31.18-201ENST00000517043 134 ntBASIC2.95□□□□□ -1.94
TBC1D3FA6NER0 RNU1-54P-201ENST00000517181 120 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms