Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MTCO2P2-201ENST00000591258 225 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 BNIP3P30-201ENST00000601184 574 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AL590095.2-201ENST00000604136 117 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AC083806.3-201ENST00000614016 455 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AC123767.1-202ENST00000620407 817 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AL359740.1-201ENST00000624340 592 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 Y_RNA.164-201ENST00000363709 102 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 MIR520E-201ENST00000384867 87 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 RNU6-952P-201ENST00000391164 108 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 RNU4-27P-201ENST00000410889 139 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 DPRXP1-201ENST00000426312 460 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 AC012308.1-201ENST00000451232 178 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 RPS27AP8-201ENST00000452665 445 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 SNRPFP3-201ENST00000457792 225 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 RNU7-136P-201ENST00000458819 69 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 SNORA31.3-201ENST00000516029 96 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 RNA5SP384-201ENST00000516615 116 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 RNA5SP503-201ENST00000517047 117 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 AC023538.1-201ENST00000534576 736 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 AC133485.1-201ENST00000567176 124 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 AC138907.6-201ENST00000568401 126 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 MIR4789-201ENST00000577469 82 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 AC126365.2-201ENST00000580630 379 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 AC090330.1-201ENST00000588646 764 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 AL365434.2-201ENST00000607979 234 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 AC005332.6-201ENST00000613178 446 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 RMST_4.1-201ENST00000616886 107 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.49□□□□□ -2.33
HLA-DRB4X5D2U9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 RNU6-487P-201ENST00000365430 104 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 RNU6-17P-201ENST00000384245 107 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 RNU6-843P-201ENST00000384454 104 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 RNU6-18P-201ENST00000384527 107 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 MIR608-201ENST00000384820 100 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 MIR19B1-201ENST00000384829 87 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 MIR508-201ENST00000384857 115 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 UBE2V1P10-201ENST00000414685 269 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 CBX3P6-201ENST00000430257 527 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 TIMM9P1-201ENST00000436122 256 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 MTND4P6-201ENST00000438297 472 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 TAF9P1-201ENST00000445421 515 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 RPL7P55-201ENST00000450522 746 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 TAF9P2-201ENST00000454958 515 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 RNU1-131P-201ENST00000458943 161 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 AC097473.1-201ENST00000508142 408 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 SNORA31.19-201ENST00000517079 126 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 MTATP6P3-201ENST00000581686 676 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 MIR4452-201ENST00000583004 71 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 BNIP3P31-201ENST00000604515 566 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 AC100814.1-201ENST00000606963 623 ntBASIC0.48□□□□□ -2.33
HLA-DRB4X5D2U9 LINC02555-201ENST00000563933 1951 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 AL359634.1-202ENST00000404721 284 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 RNU6-733P-201ENST00000410759 104 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 RAC1P6-201ENST00000423911 575 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 MTCYBP15-201ENST00000433123 1127 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 SEPT7P5-201ENST00000434048 306 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 MTND2P20-201ENST00000440805 661 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 PDCD5P2-201ENST00000507570 312 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 FABP5P5-201ENST00000515537 406 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 RNA5SP437-201ENST00000517249 129 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 AC011604.1-201ENST00000545978 196 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 MIR3664-201ENST00000579074 99 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 AC090578.1-201ENST00000604955 591 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 AC092656.1-203ENST00000624134 423 ntBASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
HLA-DRB4X5D2U9 Y_RNA.40-201ENST00000362645 93 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 MIR92A1-201ENST00000385233 78 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 Y_RNA.597-201ENST00000410463 100 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 RNU2-7P-201ENST00000410794 178 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 AC010099.3-201ENST00000423896 409 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms