Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 MIR4255-201ENST00000579351 72 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 AC078795.2-201ENST00000602835 1252 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 RMST_7.1-201ENST00000621935 268 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 Y_RNA.67-201ENST00000362870 100 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 U8.3-201ENST00000363321 132 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-387P-201ENST00000411331 105 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 MED13P1-201ENST00000428342 171 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AC119618.1-201ENST00000434191 222 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 RPL39P29-201ENST00000447779 157 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 snoU13.15-201ENST00000459407 104 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 RPL30P12-201ENST00000474666 353 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 RN7SL429P-201ENST00000479090 223 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 RN7SL489P-201ENST00000486185 223 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 RN7SL327P-201ENST00000488659 223 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AC108078.2-201ENST00000510750 236 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-123P-201ENST00000516163 102 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-991P-201ENST00000516168 107 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AP000873.5-201ENST00000533906 236 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 MTND4P33-201ENST00000556706 766 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 ZNF519P3-201ENST00000557158 1032 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AC011494.1-201ENST00000596454 237 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 DEFB131E-202ENST00000602581 683 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-87P-201ENST00000607561 108 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AL139418.1-201ENST00000613613 177 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 RN7SL853P-201ENST00000617250 223 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 AL607023.1-201ENST00000620045 248 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 MIR1248-201ENST00000629190 106 ntBASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.42□□□□□ -2.18
RHBDD3Q9Y3P4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 RNA5SP493-201ENST00000364115 91 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-1222P-201ENST00000384615 107 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 MIR578-201ENST00000384828 96 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 RNU1-78P-201ENST00000391248 165 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 AL627390.1-201ENST00000396055 340 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 RPS24P1-201ENST00000438550 371 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 AC007969.2-201ENST00000441891 191 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 RNU1-131P-201ENST00000458943 161 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 AC116337.1-201ENST00000509680 687 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 AC117522.1-201ENST00000509821 380 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 RNVU1-2-201ENST00000516326 135 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 AC087441.2-201ENST00000529141 262 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 AP005435.4-201ENST00000529514 284 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 MIR3169-201ENST00000578032 83 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 AL031281.1-201ENST00000604049 488 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 RMST_4.1-201ENST00000616886 107 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.41□□□□□ -2.18
RHBDD3Q9Y3P4 MIR504-201ENST00000385065 83 ntBASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 MIR620-201ENST00000385232 95 ntBASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 MRPL42P2-201ENST00000403169 426 ntBASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 MIR1289-2-201ENST00000408360 111 ntBASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 AL591043.1-201ENST00000432461 424 ntBASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 AC245517.4-201ENST00000448601 281 ntBASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 snoU13.9-201ENST00000458927 103 ntBASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 RNU1-98P-201ENST00000458992 160 ntBASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 AC022447.4-201ENST00000504053 364 ntBASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 SUB1P4-201ENST00000566062 339 ntBASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 AC018889.1-201ENST00000605372 397 ntBASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 MIR502-201ENST00000606349 86 ntBASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.4□□□□□ -2.19
RHBDD3Q9Y3P4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.39□□□□□ -2.19
RHBDD3Q9Y3P4 MTND4P23-201ENST00000447723 1363 ntBASIC1.39□□□□□ -2.19
RHBDD3Q9Y3P4 MTND5P10-201ENST00000603719 1809 ntBASIC1.39□□□□□ -2.19
RHBDD3Q9Y3P4 RNU6-78P-201ENST00000362897 107 ntBASIC1.39□□□□□ -2.19
RHBDD3Q9Y3P4 RNU5E-7P-201ENST00000365290 117 ntBASIC1.39□□□□□ -2.19
RHBDD3Q9Y3P4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RHBDD3Q9Y3P4 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
RHBDD3Q9Y3P4 SNORA26.9-201ENST00000391322 122 ntBASIC1.39□□□□□ -2.19
RHBDD3Q9Y3P4 RNU2-39P-201ENST00000410604 198 ntBASIC1.39□□□□□ -2.19
RHBDD3Q9Y3P4 RN7SKP51-201ENST00000410781 304 ntBASIC1.39□□□□□ -2.19
RHBDD3Q9Y3P4 RN7SKP101-201ENST00000411376 320 ntBASIC1.39□□□□□ -2.19
RHBDD3Q9Y3P4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms